Shewanella seohaensis: N7V09_02190
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Entry
N7V09_02190 CDS
T08778
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00061
Fatty acid biosynthesis
sseh00071
Fatty acid degradation
sseh01100
Metabolic pathways
sseh01212
Fatty acid metabolism
sseh02024
Quorum sensing
sseh04146
Peroxisome
Module
sseh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N7V09_02190
00071 Fatty acid degradation
N7V09_02190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N7V09_02190
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7V09_02190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sseh01004
]
N7V09_02190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sseh04147
]
N7V09_02190
Enzymes [BR:
sseh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N7V09_02190
Lipid biosynthesis proteins [BR:
sseh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N7V09_02190
Exosome [BR:
sseh04147
]
Exosomal proteins
Exosomal proteins of breast milk
N7V09_02190
Exosomal proteins of breast cancer cells
N7V09_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UXM82487
LinkDB
All DBs
Position
complement(455433..457226)
Genome browser
AA seq
597 aa
AA seq
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MSLEQYHVIRLLQQQSQSLKEAIALEGFEMAAPWHQVSWQAFDQISHKIAQVLIELGVQV
QDRCVILSQNCPQWTCADIGTLKSRAVVVPIYPTSTLEQASFIINDAAAKVIFVDDAKQY
ALACELQKQCPTLEHVIVFDASVELAQDKAQHQHLDSLLAKEYGQSAELEQRLKDANLDD
LLTLIYTSGTTGDPKGVMLDYRNMASTVRQHDQILPFTTGDVSLAFLPLSHVFERGWSFY
VLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSAEGRKKLFAW
AMGVGERQFEVSQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAALDLNVA
SFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIEVKLGKDDEILVRGDTV
MRGYYNRPEDTAAAFEDGWLKTGDAGRLDANGNLFITDRIKELMKTSNGKYIAPQRVEGT
VGRCPFIEQVAVIADARNYVTALIVPAFESLEAWAKDKGLKYESPIELLRHSHVVEHFEQ
RLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgaacaatatcacgtaattcgactattacagcagcaaagccagtcattaaaa
gaggctatagcgctggaaggttttgaaatggctgcgccttggcatcaagtcagttggcag
gcatttgatcaaatcagccataaaattgcacaggtgttgattgaacttggcgtacaagtg
caagaccgttgcgtgatcctgtcgcaaaactgccctcaatggacctgtgccgacataggt
accctgaaaagtcgtgccgttgtggtccccatttacccgaccagcaccttagagcaagcc
agctttatcattaacgatgcggcggctaaggtgatttttgtcgatgacgctaagcaatat
gcgctggcctgtgagctgcaaaaacagtgtccgaccctagagcatgtgattgtgttcgac
gcgagtgttgagctggcgcaggacaaggctcaacatcagcatttagacagtttgttagcc
aaagaatatggccagagtgctgagcttgagcagcgcttaaaggatgccaatctcgacgac
ctgttaaccctaatttatacctctggtaccacgggcgaccctaagggcgtgatgctggat
taccgcaatatggcttcgactgtgcgtcagcacgatcagatcctgccgtttaccactggc
gatgtgtcgttagctttcctaccgctaagccatgtgtttgagcgtggttggagcttctac
gtgctgtgccgtggcggccacaacgtgtatctgcaaaacactcaaagagtgaaagaggcc
atcagcgccgtgcgtccgcataccctgtgcgtggtgccgcgtttcctcgagaaggtttac
agcgcagtgcaggataaggtcgctaaatccgccgaaggccgtaaaaaactgttcgcctgg
gccatgggcgtcggcgagcgtcagtttgaggtgagccaaggccgcgctaagggcggtttg
tggttatccttgcaatggcgtttagcgcacaagctggtttacagcaagttgcaagccgtg
ctcggtgggcgcttaaagtttatgccctgcggtggtgccgccctcgatttaaacgtagcg
tctttcttccatgctattggtattccggtactttgtggttacggcatgacggaaacgaac
gctactgtgacctgtaataccctagataaccgagttgcgggttcgaacggtaaagtctta
cccgaaatcgaggtgaagctaggtaaggacgatgagattttagtccgtggcgacactgtg
atgcgcggttattacaatcgccccgaagataccgcagcagccttcgaagatggctggtta
aagacaggcgatgcgggacgactcgatgccaatggcaatttatttattaccgaccgcatc
aaagagttaatgaaaacctccaacggtaaatacattgctccgcaacgggttgaaggcact
gtgggccgttgcccctttatcgaacaagtggctgtgattgccgatgcccgtaactatgtg
acggcgctgattgtgccagcctttgaatccctcgaagcctgggccaaggataagggctta
aaatacgagtcgcctatcgagctgctacgtcacagccatgtggttgaacatttcgagcag
cgcttaaagcatttgcagcaagagttggcgggttttgagcaaatcaaaaagtttaccctg
ctgcctgaagccttttcgatggaggcgggattaatcaccccgacgctgaaattgcgccgc
aaaatgatttaccacaagtacgcccatgaaattaatgctatgtacaataattga
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