Shewanella seohaensis: N7V09_02750
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Entry
N7V09_02750 CDS
T08778
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh03030
DNA replication
sseh03410
Base excision repair
sseh03420
Nucleotide excision repair
sseh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N7V09_02750 (polA)
03410 Base excision repair
N7V09_02750 (polA)
03420 Nucleotide excision repair
N7V09_02750 (polA)
03440 Homologous recombination
N7V09_02750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sseh03032
]
N7V09_02750 (polA)
03400 DNA repair and recombination proteins [BR:
sseh03400
]
N7V09_02750 (polA)
Enzymes [BR:
sseh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N7V09_02750 (polA)
DNA replication proteins [BR:
sseh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N7V09_02750 (polA)
DNA repair and recombination proteins [BR:
sseh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N7V09_02750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N7V09_02750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UXM82569
LinkDB
All DBs
Position
complement(579123..581891)
Genome browser
AA seq
922 aa
AA seq
DB search
MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV
VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGT
IARQASRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNA
DMLKLSYELATIKTDVELEQDWHELEAKPADRDELIKCYGEMEFKRWLAEVLDNKAPTTV
AAKVETTETQEESAPSVTIETQYDTILTEAQLDEWIAKLKQAPLMAVDTETTSLDYMVAE
LVGLSFALEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPILEDAKLKKVGQNLKYDISV
LANAGIQLQGVIFDTMLESYVFNSIASRHDMDGLALKYLGHKNIAFEDIAGKGAKQLTFN
QIPLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIELPLIQILSDIERQGVFI
DSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVIKKTPKGAP
STAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATG
RLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQDAGLLKAF
AEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTY
IDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP
MQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAETLKLKVCELMAK
AANLDVELLAEAGIGDNWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatagccaataacccacttgtccttgtggatggatcttcttatttatatcgc
gcctattatgcgcctcctcacctgacaaactcaaagggcgaagctactggtgctgtttat
ggcgtagtgaatatgctccgcagcttattaagccgttatcaacctagccatatcgctgtg
gtgttcgacgctaaaggcaaaaccttccgcaatgacttatatgaagaatacaaggcgcat
cgcccacctatgccggatgacctgcgctcacaaattgaaccactacaccgtattatccgt
gccttgggcttgccgttaatctctattcctggtgttgaggcagacgatgttatcggcact
atcgctcgccaagcgagccgcgaaaaccgcgcagtactcatcagcactggcgataaagac
atggcgcagctggttgatgaaaatatcacgctgatcaacaccatgacagataccatcatg
ggtcctgaagaagttgcggctaaatatggtgttggcccagacagaattatcgatttcttg
gcgctgatgggtgataaggcagataacattcccggtttacccggcgtaggcgaaaaaacc
gcattagccatgctcacaggggcgggcagtgtcgccaatttgcttgcagagcccgaaaaa
gtcaccgaattaggctttaggggcgcaaaaaccatggcggcgaaaatcatcgacaatgcc
gacatgctaaaactgtcctatgagcttgccaccattaaaaccgatgttgagctagaacaa
gattggcatgaactcgaagccaaacccgctgacagggatgagctgatcaaatgctatggt
gaaatggaatttaaacgctggcttgccgaagtcttagataataaagcgccaacaacggtc
gctgcaaaagtcgaaacgaccgaaacccaagaagaatcagcgcccagcgtcacgattgaa
actcaatacgatacgattctgaccgaagctcagctcgatgagtggattgccaaactcaag
caagcgccattaatggccgtggataccgagaccaccagcctcgactatatggttgcggaa
ttggttggcctgtcctttgcacttgaagcgggtaaagccgcctatctgcccttagcccac
gattatgttggcgcgcctcaacaattagacaagcaaactgcactcgaaaaactgcgcccg
atactcgaagacgccaagctcaaaaaagtcggtcaaaacctgaaatatgacatcagcgta
ttggccaatgcaggcatacaactccaaggcgtgatattcgacactatgctcgaatcctat
gtgtttaactcgatcgcatcacgccatgatatggatgggttggcgcttaaatacctaggc
cataaaaatatcgcctttgaagatatcgcgggcaaaggtgctaaacagctaaccttcaat
caaattccgttggaaacagcagcgccctatgcggcggaagatgccgatattaccctacgc
ctacatcaacatttgtggccaagactcgaaaaagagaccgaattagcctcggtctttacc
gatattgaactgccgctgatccaaatactgtccgatattgaacgccaaggtgtgtttatc
gatagcatgttgctcggccaacagagtgatgagcttgcccgcaaaatcgatgagttagaa
acaaaagcatatgatattgcaggtgaaaaattcaatttaagctcaccaaagcaactacaa
gtgctgttttttgaaaagctgggttatccggtcatcaaaaagacccctaagggcgccccc
tctaccgcagaagaagtgctggttgagttggcgctggatttccctctgcctaaagtgatc
cttgagcatagaagcctaaccaagctaaagagtacttacaccgacaagctccctctaatg
gtgaacgcgaaaacgggtcgggtacacacaagctaccatcaggccaacgccgcaacgggg
cgtttgtcctcgagcgaaccaaacctacagaatattcctatccgcaccgaggaaggtcgt
cgtattcgccaggcctttattgcgccgcaaggacgtaagattttggccgccgactattcg
cagattgaattacggatcatggcgcatttatcccaagatgcgggcttactgaaagccttc
gccgaaggcaaagacattcacagagctaccgccgccgaagtatttggcaccgactttgac
agcgtcacctcggagcagcgtcgccgcgccaaagccgttaactttggcctgatctacggc
atgtccgcttttggattggcgcgtcagctcgacatcccccgcaacgaggcacaaacttac
atcgacacttacttcgctcgctatccaggcgtattaaggtatatggaagaaacacgagcc
agtgcagcagaacttggctatgtctctacgctatttgggcgccgtctctatttacctgaa
attcgcgaccgcaatgcaatgcgccgccaagccgcagaaagggccgcgattaatgcccca
atgcaaggcaccgccgcggatatcataaaaaaagccatgatcagcattgccgattggata
aaaaccgatacccaaggtgaaatcgccatgatcatgcaagtccacgacgaattagtattc
gaagtcgatgccgataaagccgaaacactcaagctcaaggtgtgtgaactcatggccaaa
gcggccaatctggacgtggaacttctggcagaagctggtattggcgataactgggatcaa
gcccactag
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