Shewanella seohaensis: N7V09_04180
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Entry
N7V09_04180 CDS
T08778
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00061
Fatty acid biosynthesis
sseh00071
Fatty acid degradation
sseh01100
Metabolic pathways
sseh01212
Fatty acid metabolism
sseh02024
Quorum sensing
sseh04146
Peroxisome
Module
sseh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N7V09_04180
00071 Fatty acid degradation
N7V09_04180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N7V09_04180
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7V09_04180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sseh01004
]
N7V09_04180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sseh04147
]
N7V09_04180
Enzymes [BR:
sseh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N7V09_04180
Lipid biosynthesis proteins [BR:
sseh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N7V09_04180
Exosome [BR:
sseh04147
]
Exosomal proteins
Exosomal proteins of breast milk
N7V09_04180
Exosomal proteins of breast cancer cells
N7V09_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UXM82798
LinkDB
All DBs
Position
complement(906967..908631)
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AA seq
554 aa
AA seq
DB search
MDNAIKTPVEMLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPG
DKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWA
DQEASVGGELLRLAMPYETMPAQYQWEQLLKMGNPLIEAPLPELDQTMTLIYTSGSTGQP
KGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVGKLNLLLKIPLISSLVKHKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKP
VQDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGATLQAREEV
RASLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAQVRWEDELSAK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggataatgcgattaagacgccagttgaaatgttggcgcactgggcgaatacacgtggg
gatgagatctatttgcgccagcccatcaagggtcaataccttgatttcacgtggaatgaa
gtgcaagaaaaagtgcagcaactcgcgggtgcactgcgccatttaggcttagagccgggc
gataagattgccgtgctctctaaaaactgcgccgaatggtttattaccgacctcgccttg
atgcacggcggctatatcagcgttcccatctaccccaccgccaatacagatactatccgc
tatgtgttgcaacatagtggtgccaaagcgattttcctcggcaagctcgaccactgggcc
gatcaagaagccagcgttggcggcgaattactccgccttgccatgccctatgagaccatg
ccggcccaatatcagtgggagcaactgctcaagatgggcaaccctctgattgaagcgccg
ttacctgagcttgatcagaccatgaccctgatttacacctcgggctcaacgggccaacct
aagggcgcgattcagacgtttgccagctatggctggacttgccaagcggtggtgcgcgat
ctgcgtaccaacggcaacgacagattattgtcctacttaccgttagcgcatattaccgag
cgtgtggcgatcgaaggctcgtctttttattctggcagcacagttgccttcgtcgaaagc
ttagactccttcgttgccgatgtgcagcgcgctaaaccgacggtgtttttctcggttccg
cggctgtggagtctgttccagaagaacattatcgacaagattggtgttggcaaactcaat
ctattgctaaaaatcccactgattagcagcctagtaaaacacaagatccacaaagggtta
ggactcaaccattgccgtttactcggctctggttctgcgcctattccgccctcactgatt
cactggtaccacagcattggcttggatatttgtgaagcctgggggatgacggaaaactgt
gcttactccatcatcaactatcccttcgatgtgcgcaaaatcggcactgtgggtaaaccc
gtgcaggattgccaaatccgccaaggtgaagacggcgaactgctgctgaagagtcccggc
ctgatgacggcctattatctgcaacccgaagcgacagcggcggccttcgatcccgatggt
ttcttccatactggcgacctctgcgctatcgatgccgatggctgtgtgactatcactggc
cgcgtgaaggacaactttaaaaccgctaagggtaaatacgtcgccccagtgccaattgaa
cgtaagctcgcgcaggatccccatgtggagctgatttgcgtcattggttctggtctgccg
catcccgtcgcattagtacaactttccgagggcgcgaccttacaagcccgcgaggaagtt
cgtgcatctttaaaagcgaccctcgatagcgtgaacccacatttagagtcccatgagcat
gtggatgcaattgtggttgtgaacgagccttggaccatcgaaaacgatgtgttaactccg
acactgaagatcaaacgtcatgtgctcgagaaggcatttagcgagcgtgtcgacggtatt
cgcggtgcgcaagtacgctgggaagatgagttatctgcaaaataa
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