Shewanella seohaensis: N7V09_05745
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Entry
N7V09_05745 CDS
T08778
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sseh03009
]
N7V09_05745
Ribosome biogenesis [BR:
sseh03009
]
Prokaryotic type
ribosomal protein modification factors
N7V09_05745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
UXM83054
LinkDB
All DBs
Position
1260863..1263049
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
SRDIPTDNIRLSQNNIVDPEDRYNQIFQINVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFRIETVENLDADANAMLMGHPGDDSSTYILGKDLPLEQTIANMTGILAELGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IANSEFVHYPNEKWFALEEDDALPAGLLDDYCLEIYNPDEELCGSHLIDTNSGNRDRGIC
AIPYKRKSDGETVYFPSNLIENLFLSNGMSAGNNIKEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMSVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNQEEADRLFGILEDLGKEVYVAEFTALGASACRILVPDYSEVY
PVEDLIWDNTNKALDYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGKLTIIELKILIYLALGAHEEALELVGEFLQFNDNTVKRNLFFQAMSAVLEVTLDED
LELEDFSHNFTRMFGAEVMEQVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHA
ARKANAVK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaacctgagactcgaagccaagttcgacgatttt
acggtaacggccgatcagcccatccgttataagggcgacggctcggcgccgagtcccttc
gactacttcttagcttcttcggcattgtgcgccgcctactttgtgaaggtatattgtaaa
tctcgcgatattccgacggacaatatccgcctgtcgcaaaacaatattgtcgacccagaa
gatcgctacaaccagattttccagatcaatgtcgaattgcccgatgatatttcggataaa
gatcgcgaaggtattttgcgctccatcgaccgctgcaccgtgaaaaaagtcgtgcagact
ggcccagaatttagaatcgaaaccgttgaaaacctcgatgccgacgccaatgccatgttg
atgggtcacccaggcgacgacagcagcacctatattttgggtaaagacttaccgctagag
cagaccattgccaatatgactggcattttggctgagctggggatgaagattgagatctcc
tcatggcgtaacattgtgcccaatgtgtggtcactgcatatccgtgatgccgcatcgccc
atgtgttttaccaatggtaaaggcgcaaccaaagagagcgcgctgtgctcggccctcggt
gagtttatcgagcgtttaaacaataacttcttctataacgaccaattctttggggttgag
attgctaacagcgagtttgtgcattatcccaacgaaaaatggtttgctctcgaggaagac
gacgctctgccagcggggttgttagacgactactgcctagagatttataaccccgatgag
gagctgtgtggctcgcatcttattgacactaactcgggcaatcgtgaccgtggcatttgt
gcgattccgtacaagcgtaaatccgatggcgagactgtgtacttcccatcaaacctgatt
gaaaacctgttcttaagcaatggcatgagcgcgggtaacaacatcaaagaagccgaagta
cagtgtctgtctgaaatcttcgagcgcgcggtgaaacgccaaattatcgagcaggaaatc
gttctgccagacgtgcctatgtcggtattagaaaaatacccaagcattcttgcgggcatt
aagggcttagaagaacaaggcttcccagtggtggtgaaagacgcctccttaggcggccag
ttccctgtgatgtgcgtgacgctgatgaacccgaaaaccggcggggtattcgcctccttc
ggtgcccacccaagctttgaagtggcattggagcgcagtctgaccgaattgctccaaggt
cgcagcttcgaaggcttaaacgatgtgccaaaaccgacctttaacagcatggcggtgagc
gagcctgaaaactttgttgagcactttatcgactcaacgggggtgatctcatggcgcttc
tttagcagcaagcatgactatgagttctgcgaatgggatttctctggcactaaccaagag
gaagcggaccgcttattcggcattttagaagatctaggtaaagaggtgtatgtcgccgaa
tttaccgcattaggcgcatcggcttgccgtattttagtgcctgattactctgaagtttat
ccagttgaagacctgatttgggacaacaccaacaaggcgctggattaccgtgaagatatc
ctaaatctgcattctttaagcactaagcaattggttaacctagtcaatcgtttagaagaa
agtcagctcgataactacaccgatattcgtaccctgattggtatcgtcttcgatgaaaat
accgtctggggcaagttgacgattatcgaacttaagatcctgatttatctggcactcggc
gcgcatgaagaggcgctggaattagtcggtgagttcctgcaatttaacgacaataccgtg
aagcgtaatctgttcttccaagcaatgagcgcggtactggaagtgacgctggatgaagac
cttgaactcgaagactttagccataactttacccgcatgtttggcgcagaagtgatggaa
caagtggtcggcagcgttacgggtaaagtccgtttcagcggtttaactaagaccagtatg
cagctcgaagggattgaaccgcacctaagacttatcgaaagctataaaaaactgcacgcc
gcccgcaaggctaacgcggttaagtaa
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