Shewanella seohaensis: N7V09_08060
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Entry
N7V09_08060 CDS
T08778
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sseh
Shewanella seohaensis
Pathway
sseh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7V09_08060 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sseh03019
]
N7V09_08060 (rppH)
Messenger RNA biogenesis [BR:
sseh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N7V09_08060 (rppH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
SAMP2
Motif
Other DBs
NCBI-ProteinID:
UXM83436
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Position
1799911..1800435
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AA seq
174 aa
AA seq
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MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGETAEEAMYRELYEEVGL
RPEHVTILTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAVTALSFQTQEIPRKRVRQRTTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagcgacggctttcgcgcaaatgtgggcataataatttgtaatagatacggc
caagtcatgtgggccagacgattcggacaacattcatggcaatttcctcagggcggcgtc
gatgatggtgagacggcagaagaggcgatgtaccgtgaattgtatgaggaagtaggctta
agacctgagcatgtcactatattaacctcgacccgttcttggttgagatatcgtttacct
aaacgtttagtgaggcaggacagcaagcctgtgtgtatcggccaaaaacaaaaatggttt
ctgttacaactcaaaagccaagatagtgcgattaatttaagttcttcaggccaccctgag
tttgacgattggcgttgggtaagttattggtatcctgtgcggcaagttgtctcatttaag
cgtgatgtttatcgtaaggtcatgaaagaatttgcggtaacggcattgtcattccaaacc
caggaaattccgaggaagcgggtaagacaaagaacaacgggctga
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