Shewanella seohaensis: N7V09_09780
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Entry
N7V09_09780 CDS
T08778
Symbol
agaR
Name
(GenBank) transcriptional repressor AgaR
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sseh03000
]
N7V09_09780 (agaR)
Transcription factors [BR:
sseh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
N7V09_09780 (agaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
Sigma70_r4
Sigma70_r4_2
CggR_N
FaeA
HTH_28
Rrf2
HTH_23
HTH_Mga
HTH_Tnp_ISL3
FeoC
HTH_AsnC-type
PaaX
Put_DNA-bind_N
Sigma70_ECF
DUF6847
Peptidase_M29
HTH_psq
HTH_22
EAP30
Motif
Other DBs
NCBI-ProteinID:
UXM83710
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Position
2195772..2196557
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AA seq
261 aa
AA seq
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MSTLNTIERQQEIVRMTQLQGKVSVAELAEHFGVSEVTIRSDLAMLDQKQLLVRSRGGAM
VNSELIRELSLKEKGSCHSALKQELGKAAAALVQNGDRLLLDSGTTTQQVAANLMEHKDL
IVMTNGLNIATELAKADEVEVMLTGGLLRKKSLSFYGNIAENSLRDYNFNKLILGVDGFD
LRVGLTTHFEKEASLNRMMCEIASEIIVVTDSSKFDQQAFHVICSSRRITRLVTDTGIPE
RYVDELTKQGVQLHLIEKANL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgagtactttgaacacgatagaaaggcagcaggaaattgtgcgaatgacacagttacag
ggaaaggtctctgttgccgaactcgcagaacactttggggtatctgaagtcacgatccgc
agcgatttagccatgttggatcaaaagcagttactggtgcgctcccgaggcggcgctatg
gtcaacagcgagttgatccgggagttatcactgaaggagaaaggcagttgccattcggcc
ttaaagcaagagttaggtaaggccgcggcggccttggtgcaaaacggcgatcgcttattg
ctcgactcggggacgaccacccaacaggtggcggcgaacctgatggagcataaggacctg
atcgtgatgaccaatggcctgaatatcgccaccgaattggctaaggctgacgaagtggag
gtgatgttaaccggcggactgttacgtaaaaaatccctgtcgttctacggcaatatcgcc
gagaacagcctgcgggattacaactttaacaagttgattttaggggtggatggtttcgat
ttgcgggtgggattaaccactcactttgaaaaagaggccagcctcaaccgaatgatgtgt
gagatagcgagtgaaattatcgttgtgactgactcatcaaagtttgatcaacaagcattc
cacgttatttgcagcagtcgccgtattacgcgcctagtgacagataccgggatcccagag
cgctatgttgatgaattaactaaacaaggtgtgcaattacacctcattgagaaagctaat
ttataa
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