Shewanella seohaensis: N7V09_09880
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Entry
N7V09_09880 CDS
T08778
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sseh03000
]
N7V09_09880
Transcription factors [BR:
sseh03000
]
Prokaryotic type
Helix-turn-helix
Other families
N7V09_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
UXM83727
LinkDB
All DBs
Position
complement(2216400..2217632)
Genome browser
AA seq
410 aa
AA seq
DB search
MYVLDQHIAKQIVSRTMKIIGHNINVMNGQGVILGSGDPKRIGSTHEGALLAIAQNRNVE
LSEEVASGLHGVKPGINLPLHYQGQIIGVIGITGDPAELTHYGELLKMTAEMIVEQANQQ
DQQQWENRQREEFILQLIKAQTDDDEQLHRWAKQLDIDINLPRVAAIIEVSEKQSTPTQQ
KSAAFSSLIQSEQSADERNPRVSEILKQVLHLLQNPDRGNLIAMTSMSQLVILKPAFLDG
KQWDPELENQRIDKLLQRLPAQMDLNFKIALGHFFPEKGGIARSYQTAQETLNLGKQLNP
EGTKYLFEDYSLQVLLSGLKHDWRGQALASPYQQLAKADKNGQLRKTLAAYITHFGDAQQ
CANALFIHRNTLRYRLDKIQQLTKSDIHSLHGLLSLYLGQLIDTSNYRLE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttttggatcaacacatcgctaaacaaattgtgagtcgcaccatgaaaatcatt
gggcacaatatcaatgtgatgaatggtcagggcgtgatcttaggctccggcgatcccaaa
cgtattggctcgacccacgagggtgcactgcttgccatcgcccaaaaccgcaatgtggaa
ctgagtgaagaagtggcctcaggcttacatggcgtcaaacccggcatcaacttacccttg
cattatcaagggcaaattattggggtgattggtattactggcgatccggccgagttaacc
cactacggtgagctgctaaaaatgaccgccgagatgattgtcgaacaagccaaccagcag
gatcagcagcagtgggaaaatcgtcaacgtgaagaatttattctgcagttaattaaggca
caaaccgatgacgatgagcaattgcatcgctgggccaagcaactcgatatcgatatcaat
ttgccgcgagtggccgccataattgaagtcagtgaaaaacaatccacgccaacccagcaa
aaatccgctgcgttttcttcattaatccagagcgagcaaagcgcagacgagcgtaatccc
agagtcagcgaaatcctcaagcaagtgctgcatttgctgcaaaaccccgacagaggcaac
ttgattgccatgacatccatgtcacagctggtgatcttaaaaccggcgtttctggatgga
aaacaatgggatcccgagcttgaaaatcagcgtatcgataaactgctacaacgtttaccc
gcgcaaatggatttaaattttaaaatcgcccttgggcattttttccctgaaaaaggcggt
attgcgcgctcctaccaaaccgcgcaggaaaccttgaacttaggcaagcagcttaacccc
gagggcactaaatacctgtttgaagactactccttgcaagtgctgttatctgggctcaag
catgattggcgtggtcaagcgctggccagtccctaccaacagttagccaaggccgataaa
aatggtcagttacgcaaaaccctagccgcctatatcactcattttggtgatgcgcagcaa
tgcgctaatgcgctgtttattcaccgaaatactctaaggtatcggttagataaaattcag
caactcaccaagagtgacatccattccctccacggattattaagtctttatcttgggcag
ttgatagatacctcaaattaccgactcgagtag
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