Shewanella seohaensis: N7V09_10230
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Entry
N7V09_10230 CDS
T08778
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sseh03400
]
N7V09_10230
DNA repair and recombination proteins [BR:
sseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N7V09_10230
Archaeal homologous recombinant proteins
N7V09_10230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF2379
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UXM83777
LinkDB
All DBs
Position
2296689..2297891
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AA seq
400 aa
AA seq
DB search
MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV
ALLDEVLNRLITELGLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLSS
PSGDAYFYPLPYAEPATVRQVFEADAKGLSVSSHEEAMSLLLEQVRSHDSQGLPKVVVSH
CFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQYKGREHVRYSGSILKYS
FSEQHQHKSVTLVDIAAHTPAQIQLLPLTALRDVRIIEGELAHLLDLGKTDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGEQAVALNRDHIKKGEMAMFRDFFSQVS
GEELSDAQQAVMDEILTKLHGDEGDSGGSTRVAAKGEQSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatccatacctcggactggcacattggtcgccagttacataatcaatcactc
ttagaagaccaagcctatgtgcttgatcaaatcgtgacattggctgagcagcacactgtc
gatgcggtgattattgccggggatatttacgataggtcgattcctccggccagcgccgtg
gctttgctcgatgaggtgcttaatcgcctcatcaccgagttaggattacaagtgctgatg
attgccggtaaccacgacgggcacgaacgtttaggctttgcggctaaacaaatggcggca
agtggcttacacattattgggccgcttcaggctgatttaacgccgatccgcttaagcagc
ccaagtggcgatgcttacttttatccgctgccttacgccgaaccagcaaccgtgcgccaa
gtatttgaggcggatgctaaggggctcagcgtatccagccatgaagaggcgatgtcgcta
ctgctagagcaagtccgcagccacgatagccaagggttacctaaagtcgttgttagtcat
tgctttttagatggtggcagtgagtccgagtccgagcggccattgagtattggcggcgcc
gataaaatttccccacggctttttagtgagtttgactatgtcgccctcggccacttacac
ggtccgcaatataaaggccgtgaacatgtacgttattctggctcgattttgaaatactcc
tttagcgaacagcatcaacataagtctgtcaccttagtcgacatcgccgcgcacactccg
gcgcagatccaactcttgccattaaccgcgctgcgcgatgtgcggattatcgaaggagaa
ttggcgcatttattagatcttgggaagaccgatgccaagcgtgaggattacctgatggtc
agactccttgataaacacgccattttagatgccatgggcaaattgcgcagtgtctatccc
aatgtgctgcatctagaacgtactggattaatggcgggcgaacaggccgtcgcactcaat
cgcgaccatatcaaaaaaggcgaaatggccatgttccgtgatttttttagtcaggtttct
ggcgaggagttgagtgatgcgcagcaagcggtcatggatgagattttaactaagcttcac
ggggatgaaggcgatagcggtggatctactcgcgttgcagcaaaaggggagcaatccgca
tga
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