Shewanella seohaensis: N7V09_10235
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Entry
N7V09_10235 CDS
T08778
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sseh03400
]
N7V09_10235
DNA repair and recombination proteins [BR:
sseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N7V09_10235
Archaeal homologous recombinant proteins
N7V09_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
GTP_EFTU
DUF5969
Motif
Other DBs
NCBI-ProteinID:
UXM83778
UniProt:
A0A9Q9N4G7
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All DBs
Position
2297888..2300944
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AA seq
1018 aa
AA seq
DB search
MKPLSLSMSAFGPFASTQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLYKI
AQDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRALVKEQRARRDGILQTAALTSDVELVAEFSRIEPEFAA
ATAAKEQSVAAHLAVLKQRDSAQQLFAEFTRLQELQAEALSLNEQQAHIATQTTRLEVAK
QALRVKPLLDNALSREQEASVAAFQRDSAQSTLDAAKLALAHAETAAQEIIPLEHKLRDL
EQQHSHLSALVPQLAEFTSLEQALAQAKEILQHTKLQGQESKNALAALVEQRSHCENQLP
ALQQQSEQQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGILEQVGSQGKALNTQYQTA
STAYKSLQLKWFQGQAAILARELKPHEPCPVCGSSAHPHPAVSHEDLPTDLQLQAAQDAE
ALALDNLNKARAEYRGLQKQLETQQQQANELATALGDKVELSLESHSQTLERLMQQAKQA
DSAAQALQQLQQQIKTLQQQESTLTQQLELERERYREQEGKVERLSGQFAEKALRIPEEY
RTLEVLNQAIANNQQQLEQIKRQIDALRTAQQQATQQSVAAQTTLSAAIERCHATADLQA
QAQQTLLTALDNAGFIDRDALREALLTDEQMQVLAEGIETYHRQCALNQSQLTQLTTKLS
ESTSPDLDALEALLTERLAQLKAAEEVWSQLNTRLTLLNNTQTQLAVVDQKAKSLEDEYA
VVGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKVILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactctcgctgtcaatgtcggcctttggccctttcgcctcgactcaaactatt
gattttaccgaactggggaataaccctttattcctgatcaacgggccaacaggcgcgggc
aaaaccacgctgctcgacggaatttgttttgcgctttacggcaaaaccacgggtaacgaa
cgcgaaggtagccagatgcgctgcgatatggccgatgatagcgtactgactgaggtaacc
tttcattttcaattaggtagtacgggttatcgtattcgccgcgtccccgagcaggaaaga
ttaaagaaaagcggtgatggctcaacggtacaaaagagtgaggcacagctgtataagatt
gcccaagatggcagtgaaacccttatcgtcgccagtaaagtgtcagacgccacggccgaa
attgaggcattaaccggcttagatgtggagcagttccgccaagtgatggtgctgccgcag
gggaagtttcgcgaattgctgatggccgactctaaggcgcgtgagcagatttttagccaa
ttattccaaacccatatctataagcgcatcgaagatactctaaaggctaaggcggcggat
attcgcgccttagtgaaagagcagcgcgctcgccgtgacggtattttgcaaacggcagca
ctcacatccgatgttgagcttgttgctgagtttagtcgcattgaacccgaattcgcggcg
gcgacggcagcaaaggagcaaagtgttgcggcgcatttagcggtattaaaacagcgtgat
agtgcgcagcaactctttgctgaatttactcgcttacaggaattgcaggctgaggcgctt
agccttaatgaacagcaagcgcatattgcaacccaaacgacacggcttgaggtggccaag
caagcgctgcgggtaaaacccttattagataatgccttgtcgcgggagcaagaagcgagt
gttgcagcattccagcgcgatagtgcgcagtcgacgctcgatgccgccaagctcgccctc
gctcatgctgaaactgcggcgcaggaaattattcccctcgaacataagctgcgcgacctt
gagcaacaacacagtcatctcagtgcgttagtgccgcagctggcagagtttaccagtctt
gaacaagctttagcgcaggcaaaagagatactgcaacacactaagttgcagggacaggag
agtaaaaatgcgcttgcagctttagttgagcagcgcagccattgtgagaatcaactgcca
gccttgcaacaacaaagtgagcagcaacttgccactgcgcaggcgttacagcagcaccgt
catatgctcgagcagttcaagcagtggcagcagatctgtgccaaagttgcgcacactcaa
gggattcttgagcaggtcggctcacaaggaaaagcactaaatacccaatatcaaactgcc
tcaacggcttacaagtctttgcaactgaagtggtttcaaggtcaggctgctattttagct
agagagttaaaaccccatgagccatgcccggtttgtggcagttcggcccatccgcatccc
gcggtgagtcatgaggatttaccaacggatctacaattgcaggcggcgcaggatgccgag
gccttggcgctcgataatctcaataaagcgcgggcagaatatcgtgggctgcaaaagcaa
ttagaaacacagcaacagcaggcgaatgagctggcaacagctcttggcgataaggttgag
ttgtcgctcgaatcccatagccaaaccttagaaagactcatgcagcaagcaaagcaagcg
gattctgcggcgcaggcgctgcagcagttacagcaacagatcaaaaccttgcagcagcaa
gagtcgactttgacgcagcaactggaacttgagcgtgagcgttaccgtgagcaagaaggc
aaagtcgagcggctatcgggtcaatttgcggaaaaagcgctgaggatcccagaagaatac
cgaacactggaggtattgaatcaagcgattgcgaataaccagcaacaactcgaacagata
aaacgtcagattgatgcattgagaaccgcgcagcagcaggcaacgcagcagagtgtggcg
gcgcaaacgacattatcggcggcaatagagcgttgtcatgctacggcagatctgcaggcg
caagcacagcagacactactgacggcgctcgataacgcaggctttattgatagggatgca
ttgcgcgaagccttgttaaccgatgagcaaatgcaggtgctggctgagggcatagaaacc
tatcacagacagtgcgccttaaatcagtcgcaactgactcagcttacaaccaagttgagc
gagtcgacatcacccgatcttgacgccttagaggccttgctcacagagcgactcgcgcag
cttaaagcggcggaagaggtatggagtcaactcaatactcggctcaccctgcttaacaat
acccaaactcagctggcagtggtcgatcaaaaggccaaatccctcgaggatgaatatgct
gtggttggcaccttggccgatgttgccaacggtaatacgggcaacaaaatttccctgcaa
cgctttgtgctcagtgtactgctcgacgatgtgttgcttgcggcaacgcagaggctgcat
ttaatgagcaaaggtcgctaccgattattgcgtaaagaggacagggcgaagggcaataag
gcctcagggctagagcttgaagtcgaggatgcctacacctctaaagtgcgtcccgtggcg
actttaagtggtggtgagagttttatggcagctttgtcgatggccttgggcttatcggat
gtggttcaagcttacgcgggcggaataaaactcgataccttatttattgacgaaggcttt
ggcagcctagatcaggactccctcgaacttgccattcgcacgctgatggatttgcagtcg
gcggggaggatgattggggtgatttcccatgtatccgaaatgaaagaacagataggcact
cgaattgatatcttgaaaacctcccatgggagtgaaatcaaggtgattttgccttag
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