KEGG   Shewanella seohaensis: N7V09_10235
Entry
N7V09_10235       CDS       T08778                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
sseh  Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:sseh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sseh03400]
    N7V09_10235
DNA repair and recombination proteins [BR:sseh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     N7V09_10235
    Archaeal homologous recombinant proteins
     N7V09_10235
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran GTP_EFTU DUF5969
Other DBs
NCBI-ProteinID: UXM83778
UniProt: A0A9Q9N4G7
LinkDB
Position
2297888..2300944
AA seq 1018 aa
MKPLSLSMSAFGPFASTQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLYKI
AQDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRALVKEQRARRDGILQTAALTSDVELVAEFSRIEPEFAA
ATAAKEQSVAAHLAVLKQRDSAQQLFAEFTRLQELQAEALSLNEQQAHIATQTTRLEVAK
QALRVKPLLDNALSREQEASVAAFQRDSAQSTLDAAKLALAHAETAAQEIIPLEHKLRDL
EQQHSHLSALVPQLAEFTSLEQALAQAKEILQHTKLQGQESKNALAALVEQRSHCENQLP
ALQQQSEQQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGILEQVGSQGKALNTQYQTA
STAYKSLQLKWFQGQAAILARELKPHEPCPVCGSSAHPHPAVSHEDLPTDLQLQAAQDAE
ALALDNLNKARAEYRGLQKQLETQQQQANELATALGDKVELSLESHSQTLERLMQQAKQA
DSAAQALQQLQQQIKTLQQQESTLTQQLELERERYREQEGKVERLSGQFAEKALRIPEEY
RTLEVLNQAIANNQQQLEQIKRQIDALRTAQQQATQQSVAAQTTLSAAIERCHATADLQA
QAQQTLLTALDNAGFIDRDALREALLTDEQMQVLAEGIETYHRQCALNQSQLTQLTTKLS
ESTSPDLDALEALLTERLAQLKAAEEVWSQLNTRLTLLNNTQTQLAVVDQKAKSLEDEYA
VVGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKVILP
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgaagccactctcgctgtcaatgtcggcctttggccctttcgcctcgactcaaactatt
gattttaccgaactggggaataaccctttattcctgatcaacgggccaacaggcgcgggc
aaaaccacgctgctcgacggaatttgttttgcgctttacggcaaaaccacgggtaacgaa
cgcgaaggtagccagatgcgctgcgatatggccgatgatagcgtactgactgaggtaacc
tttcattttcaattaggtagtacgggttatcgtattcgccgcgtccccgagcaggaaaga
ttaaagaaaagcggtgatggctcaacggtacaaaagagtgaggcacagctgtataagatt
gcccaagatggcagtgaaacccttatcgtcgccagtaaagtgtcagacgccacggccgaa
attgaggcattaaccggcttagatgtggagcagttccgccaagtgatggtgctgccgcag
gggaagtttcgcgaattgctgatggccgactctaaggcgcgtgagcagatttttagccaa
ttattccaaacccatatctataagcgcatcgaagatactctaaaggctaaggcggcggat
attcgcgccttagtgaaagagcagcgcgctcgccgtgacggtattttgcaaacggcagca
ctcacatccgatgttgagcttgttgctgagtttagtcgcattgaacccgaattcgcggcg
gcgacggcagcaaaggagcaaagtgttgcggcgcatttagcggtattaaaacagcgtgat
agtgcgcagcaactctttgctgaatttactcgcttacaggaattgcaggctgaggcgctt
agccttaatgaacagcaagcgcatattgcaacccaaacgacacggcttgaggtggccaag
caagcgctgcgggtaaaacccttattagataatgccttgtcgcgggagcaagaagcgagt
gttgcagcattccagcgcgatagtgcgcagtcgacgctcgatgccgccaagctcgccctc
gctcatgctgaaactgcggcgcaggaaattattcccctcgaacataagctgcgcgacctt
gagcaacaacacagtcatctcagtgcgttagtgccgcagctggcagagtttaccagtctt
gaacaagctttagcgcaggcaaaagagatactgcaacacactaagttgcagggacaggag
agtaaaaatgcgcttgcagctttagttgagcagcgcagccattgtgagaatcaactgcca
gccttgcaacaacaaagtgagcagcaacttgccactgcgcaggcgttacagcagcaccgt
catatgctcgagcagttcaagcagtggcagcagatctgtgccaaagttgcgcacactcaa
gggattcttgagcaggtcggctcacaaggaaaagcactaaatacccaatatcaaactgcc
tcaacggcttacaagtctttgcaactgaagtggtttcaaggtcaggctgctattttagct
agagagttaaaaccccatgagccatgcccggtttgtggcagttcggcccatccgcatccc
gcggtgagtcatgaggatttaccaacggatctacaattgcaggcggcgcaggatgccgag
gccttggcgctcgataatctcaataaagcgcgggcagaatatcgtgggctgcaaaagcaa
ttagaaacacagcaacagcaggcgaatgagctggcaacagctcttggcgataaggttgag
ttgtcgctcgaatcccatagccaaaccttagaaagactcatgcagcaagcaaagcaagcg
gattctgcggcgcaggcgctgcagcagttacagcaacagatcaaaaccttgcagcagcaa
gagtcgactttgacgcagcaactggaacttgagcgtgagcgttaccgtgagcaagaaggc
aaagtcgagcggctatcgggtcaatttgcggaaaaagcgctgaggatcccagaagaatac
cgaacactggaggtattgaatcaagcgattgcgaataaccagcaacaactcgaacagata
aaacgtcagattgatgcattgagaaccgcgcagcagcaggcaacgcagcagagtgtggcg
gcgcaaacgacattatcggcggcaatagagcgttgtcatgctacggcagatctgcaggcg
caagcacagcagacactactgacggcgctcgataacgcaggctttattgatagggatgca
ttgcgcgaagccttgttaaccgatgagcaaatgcaggtgctggctgagggcatagaaacc
tatcacagacagtgcgccttaaatcagtcgcaactgactcagcttacaaccaagttgagc
gagtcgacatcacccgatcttgacgccttagaggccttgctcacagagcgactcgcgcag
cttaaagcggcggaagaggtatggagtcaactcaatactcggctcaccctgcttaacaat
acccaaactcagctggcagtggtcgatcaaaaggccaaatccctcgaggatgaatatgct
gtggttggcaccttggccgatgttgccaacggtaatacgggcaacaaaatttccctgcaa
cgctttgtgctcagtgtactgctcgacgatgtgttgcttgcggcaacgcagaggctgcat
ttaatgagcaaaggtcgctaccgattattgcgtaaagaggacagggcgaagggcaataag
gcctcagggctagagcttgaagtcgaggatgcctacacctctaaagtgcgtcccgtggcg
actttaagtggtggtgagagttttatggcagctttgtcgatggccttgggcttatcggat
gtggttcaagcttacgcgggcggaataaaactcgataccttatttattgacgaaggcttt
ggcagcctagatcaggactccctcgaacttgccattcgcacgctgatggatttgcagtcg
gcggggaggatgattggggtgatttcccatgtatccgaaatgaaagaacagataggcact
cgaattgatatcttgaaaacctcccatgggagtgaaatcaaggtgattttgccttag

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