Shewanella seohaensis: N7V09_10540
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Entry
N7V09_10540 CDS
T08778
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sseh02000
]
N7V09_10540
Transporters [BR:
sseh02000
]
Other transporters
Pores ion channels [TC:
1
]
N7V09_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2490
OMP_b-brl
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
UXM83831
LinkDB
All DBs
Position
2363496..2365724
Genome browser
AA seq
742 aa
AA seq
DB search
MKSRFAYSILTLALMPHLGFAVEPNAQESKPEQENASAAQSATQASTQALAQTNVQTDTK
APEHIVVRGRAMQMYVDKETEIGTKTAVNVMELPQSVQVLTEQLIDDQAARNITDLYRSI
AGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYSGFSVPQLFNVQRVEVLKGPASALYGGG
EPGGMINYVTKKPTFVERKELTLSTGSYDMMGGSLDFTGGLTEDLAYRLGGYYQQENSFR
NNADSMNAEVAGGLLYEISEDTKLTTTFDLIKQDLGGNRLRGVPVDDAGNFLVDPSYNAN
EKSDFQKMDALVLQAILDHQFTDDFSVKTQLRYLTNDSEQQYHESRGWVDVNGDGKANSA
DGTIKREYRVQARANDEISLTNDFVYRFDALGFEHEFLFGGDYHYVETEYHYKLATDKTG
VGNLNIYELNYGETDPSTYQLKDMDTDGTRANRFGLYLQEHLHFNEQWSLIAGLRFSQFE
DYNKKTGFSFSDNAITPRAGLNYRPLESMSFYLNYSESFSPASLSDQEQEGGDGYLDPET
GNQIELGMKNEWLDGQFMTTLALYRIEKQNVAQANPLDTGKDDGIPDLVNLGEVRSQGVE
WTLVGDLTDNLTMTANYAYNDTEVIKGVTNDSLTNTFGDGKRFANAPRHQAGLWTRYDIQ
AIDSAIAFGMDYVGEQFSLNGQTVKPHTVFDMSWTTQWDQTQVRVNLKNIFDKEYAVSGF
SERNGHFPGEPRNVTLELSHKF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctcgttttgcctattcaatactaacgcttgccctgatgccgcatttgggtttt
gcggtagagcctaacgctcaagagagcaaacccgagcaagaaaatgcttcagcggcacaa
tccgctacccaagcaagcactcaagctttagcgcaaaccaatgtgcagactgacactaaa
gcgcccgagcatattgtggtgcgtggtcgcgccatgcaaatgtacgtcgataaagagacg
gaaatcggtacaaaaacggcggttaatgtgatggagctgccgcagtcggtacaagtgctg
accgagcaactgattgacgaccaagccgctcgcaatattaccgacttataccgctccatt
gctggggtgagtgaatttagctattccggtgtgacctttcgtggctttcgcgatgatgcc
aacgtgttttacgatggcgtgcgtggcgatccgtattcgggcttttcggtgccacaactg
ttcaacgtgcagcgggttgaagtgctaaaaggccccgcatcggcactctatggcggcggt
gaacccggcggcatgatcaactatgtcactaaaaagccgacatttgtggagcgtaaagag
ctcaccctaagcacgggcagttacgacatgatgggcggctcgctggatttcactggcggc
ttaactgaggatttagcctatcgtttagggggctattatcagcaggaaaatagctttcgt
aacaatgccgatagcatgaatgccgaagtggcgggtggcttactgtatgaaatcagtgaa
gataccaagctcaccaccacattcgatctgatcaaacaggatttgggcggtaatcgactc
cgtggtgtacccgtggatgatgcgggtaattttttggttgacccatcctacaatgccaac
gagaagagcgacttccaaaagatggatgctttggtgctgcaagcgattctcgatcatcaa
tttacggatgatttttcggtgaaaacgcagctccgttatctcacgaatgactccgaacag
cagtaccacgagtcccgaggttgggtcgatgtcaacggtgacggcaaagctaacagcgcg
gatggcacgatcaaacgtgaatatcgggtgcaagcccgtgctaatgatgaaatcagttta
accaatgatttcgtctatcgcttcgatgccttaggttttgagcatgagttcctgttcggc
ggcgattatcactatgttgaaaccgagtaccattacaaactggcgacggataaaaccggc
gtcggtaacctgaatatttatgagcttaactacggtgagactgaccctagcacttatcag
ttaaaagacatggatactgacggtacccgtgccaaccgctttggcctgtatctgcaagag
catctgcattttaacgaacagtggtcattgattgcaggcctgcgttttagtcagtttgaa
gattacaacaagaagaccggattctcctttagcgataatgccattaccccaagggcgggc
ctgaattatcgtccactcgagtctatgtctttttacttgaactattcagagagctttagt
cccgcttcattgagcgatcaggagcaggaagggggcgatggctatcttgatccagaaacc
ggtaatcaaattgagcttgggatgaaaaacgagtggttggatggccagtttatgaccacg
cttgcgctctatcgtattgaaaaacaaaacgtggctcaggcgaacccactcgatactggc
aaggatgatggtatccctgacttagtgaatttaggcgaagtgcgcagtcaaggcgtcgaa
tggacgctggtgggggacttaaccgataacctgaccatgaccgccaactatgcctataac
gataccgaagtgatcaaaggcgtgaccaacgacagcctgaccaacaccttcggcgacggt
aaacgttttgccaatgcgccgcgccatcaagcggggttatggacgcgctatgatattcaa
gcgattgattcggccatcgcctttgggatggactatgtgggcgagcaatttagcctcaat
ggtcaaacggtaaaaccccatactgtgtttgatatgagctggacgacccagtgggaccaa
acccaagtgcgcgtaaatctgaagaatattttcgataaggaatatgctgtcagtggattt
agtgagcgcaatggccatttccctggcgagcctcgcaatgtcacgcttgaactgagccat
aagttctag
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