Shewanella seohaensis: N7V09_11335
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Entry
N7V09_11335 CDS
T08778
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sseh03000
]
N7V09_11335 (hdfR)
Transcription factors [BR:
sseh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
N7V09_11335 (hdfR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UXM80538
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Position
2529927..2530784
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AA seq
285 aa
AA seq
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MDTDLLKTFLEVSRTRHFGKAAENLYLTRSAVSFRVKQLESILGVALFERQRNNIQPTPA
GERMLGHAEAVLTAWERAKQDVSLSQLQSTQLAIGAGPNIWDAYLQGHLQHLHVGLPGVA
LRTEVLPLTVMTRQLMDRTLDLAISFDPPKLDQFELVQLGQINLLLVSKIMDVAVNAVQA
GQYVKVDWGTAFNILHAQEYAALPVPTLHTSSARIALDFILNNGGCAFLPEHLVQPLLNR
GELHLVAGASAISRSVYVAYWAENDRLEQIKQAIGFLADKSAEIR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggataccgatttacttaagacctttttggaagtctcccgtacccgtcattttggcaag
gccgcggaaaatctataccttacccgcagtgcggtgagctttcgggtcaaacagcttgaa
agcattcttggcgtcgccttgtttgagcgccaacgcaacaatattcagcccacgccagcg
ggcgaacgtatgcttgggcatgctgaagcggtattaaccgcttgggagcgcgctaagcag
gatgtctctctcagtcagttacaatcgactcaactcgccattggcgcaggccccaatatc
tgggatgcctatttgcaagggcatttacagcatttgcatgtgggattacccggcgttgcc
ctgcggaccgaagtgttgccattaactgtgatgacacggcaattgatggaccgcaccctt
gatttggcgatttccttcgacccacccaaactggaccaattcgagctggtgcaattaggc
cagattaatcttctgttggtgtccaagatcatggatgtggcggtgaatgcggtgcaggcc
ggccaatatgtcaaagtggattggggtacggcctttaatatcctgcatgcgcaggaatac
gccgccttacccgtaccgaccttacatactagttcggctcgtatcgccttggattttatc
ttgaataacggtggctgcgcgtttttacccgagcatttggttcagccattgttgaatcgc
ggcgagctgcatttagttgcgggagcgagcgccatttcacgcagcgtgtatgttgcctat
tgggccgagaatgaccgcttagagcaaatcaaacaagcgattggctttttagccgataag
tctgcggaaatacgctaa
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