Shewanella seohaensis: N7V09_11535
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Entry
N7V09_11535 CDS
T08778
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
N7V09_11535
Enzymes [BR:
sseh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N7V09_11535
Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N7V09_11535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM_RLK
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
UXM80571
LinkDB
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Position
complement(2569897..2571444)
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AA seq
515 aa
AA seq
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MRVSLYVVVGGFALLTGCQTLDNHQVTKPEAETVTTENTVPQYYLATEPETAQITDVWER
IRQGMQLPVPDKKLVNYYRDWYIKNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLP
IIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTVAALDMLEYLYD
KTNNNWLYAIAAYNSGESRVLNAIKRNEDKGLKTDFWSLDLPKETERYVPQLLALAEVIK
HADEYGITLAPIENSPSIEVVDIDSQIDLAMAAGLANMTTHELLKLNPGYNRWATAPTGP
HTLVLPIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGAIAKKHHTTVNAIRAANGMK
NNTIVAGRHLIIPVSADDKQLYAMSTSQKLPKKAATSTSGNKLTYQVKSGDTLWQIAQNH
KVSVKQLTAWNHLSKDSKLQMGQKLTIVAPPTQAEVEQIRTVSYKVKSGDSLARIASKFK
VTVAELLEWNSLTSSQYIQPGQVLKLVVDESNLNA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatcactttatgttgtagtagggggatttgccctactcacaggttgtcagact
ttagacaaccatcaggtgaccaaacctgaagctgaaaccgtcacaaccgaaaataccgtc
ccacagtattatctcgcaaccgaacccgagacggcgcaaattactgatgtgtgggagcga
attcgtcaaggaatgcaactccccgttcctgacaaaaaattagttaattattatcgcgat
tggtacatcaagaaccctaaacacctcgaagtaatttctgagcgtgcggcaccttacatg
tatttgatcgtcgaagagcttgaaaagcgccatctgccgatcgagatcgcgttgctgccg
attatcgaaagcgctttcgatcccagtgcatcttctgccagtgccgcctccgggctttgg
caatttacaaccccaatggccagccattttgggttagagatgaactggtggtacgacggc
cgtcgtgatgtgcccgcctccacggtggccgcgttggacatgctcgaatacctgtacgac
aaaaccaataataattggctttatgcgattgcagcctataactcgggcgagtctcgcgtc
ctcaatgcgattaaacgcaatgaagataaaggccttaaaaccgacttttggtcactggat
ctgccaaaagagacagagcgttatgtgccacaattattggccctcgccgaagtgatcaaa
catgccgacgagtacggcattacgctagcgccaattgaaaacagcccttctatcgaagtg
gttgatatcgatagccaaattgacttggccatggcggcagggctcgccaatatgacgacc
catgagctattaaaactcaatcctggatacaaccgctgggccactgcaccgacgggaccc
catacgctggtattgccgattgataagtcagaagagtttaaaaaagcactggccgaaacc
gagagtgaagcccgtgtaagttggctcagatacaccattaaatccggtgatagtatcggc
gccattgccaagaaacaccataccacggtcaatgcgatccgtgcggctaatggtatgaaa
aataacactatcgttgcgggtagacacctgattattccggtctctgccgacgataaacag
ctgtatgcgatgtcaaccagccagaagttacctaaaaaagcggcaacttcgacctccggt
aataagttgacttaccaagtgaaatccggcgataccctgtggcaaatcgcacaaaatcat
aaggtatcggtgaaacagctcaccgcttggaaccatttaagcaaagacagtaaattgcag
atgggccaaaaactgaccatagttgcgccgccaacccaagcggaagtggagcaaattcgc
accgtcagctacaaggtgaaatcaggcgactccttagcgcgtattgctagcaaatttaaa
gtgacggttgcagagctgctcgagtggaacagcttaacttcatcgcaatacattcaaccc
ggccaagtgttaaagctggtggtggatgaaagcaatttaaatgcctaa
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