Shewanella seohaensis: N7V09_13415
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Entry
N7V09_13415 CDS
T08778
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sseh03032
]
N7V09_13415 (ihfB)
03036 Chromosome and associated proteins [BR:
sseh03036
]
N7V09_13415 (ihfB)
03400 DNA repair and recombination proteins [BR:
sseh03400
]
N7V09_13415 (ihfB)
DNA replication proteins [BR:
sseh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N7V09_13415 (ihfB)
Chromosome and associated proteins [BR:
sseh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
N7V09_13415 (ihfB)
DNA repair and recombination proteins [BR:
sseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
N7V09_13415 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
ThiS
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
UXM80867
UniProt:
A0A9Q9N270
LinkDB
All DBs
Position
complement(2977861..2978148)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEKLASRQSQLSAKEVESAIKEMLEQMATTLEGGDRIEIRGFGSFSLHYRAPRT
GRNPKTGSSVELEGKYVPHFKPGKELRERVDAVNV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgaactgatcgaaaaacttgccagtaggcagtcgcagctgtcggcaaaa
gaagtagaaagcgctattaaagagatgttggagcagatggcaacaacattagaaggcggg
gaccgtatcgagatccgtggctttggtagtttttcccttcattatcgtgcaccacgtaca
ggtcgtaatcctaagactggttcatcagttgaactggaaggcaaatacgtaccgcacttt
aagcctggcaaagaactgcgtgagcgcgttgacgcagttaatgtataa
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integrated database retrieval system
