Shewanella seohaensis: N7V09_13445
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Entry
N7V09_13445 CDS
T08778
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sseh03032
]
N7V09_13445 (gyrA)
03400 DNA repair and recombination proteins [BR:
sseh03400
]
N7V09_13445 (gyrA)
Enzymes [BR:
sseh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N7V09_13445 (gyrA)
DNA replication proteins [BR:
sseh03032
]
Prokaryotic type
DNA Topoisomerases
N7V09_13445 (gyrA)
DNA repair and recombination proteins [BR:
sseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N7V09_13445 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
UXM83928
LinkDB
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Position
complement(2985189..2987945)
Genome browser
AA seq
918 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRALAEVETEDNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARDRAHILEALAIALANIDPIIALIKASPTPAEAKVKLVEQGWALGNVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATSNGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGNP
VLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQKVVSLIVPKGDGAILTVTENGYGKRT
ELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVAEGDSVHEESLEDE
LEEELDEDEELDDEQDED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctatttcaccaattaatattgaagacgaattaaagaattca
taccttgattacgccatgagcgtgatcgtgggacgtgcattaccagacgtgcgtgatggc
cttaagcctgtgcatcgccgcgtgctgtttgccatgagtgaattgaagaacgattggaac
aagccttacaagaagtcggcacgtgttgtcggtgacgtgataggtaaatatcacccccat
ggcgactcggcggtgtatgacactatcgtgcgtatggcgcagcctttctctctgcgttac
accttagtcgatggccagggtaactttggttcggtcgatggtgactccgcagcggctatg
cgttataccgaaattcgtatggataagttagcgcaccagctcctcgccgatcttgaaaaa
gaaaccgttgactatgtgcccaactacgatggcacagaacaaattcctgctgtattaccg
acacgtgtccctaacctgttaatcaacggttcatcgggtattgcggtcggtatggcgact
aacattccgccccataacttaaccgaagtcgttaagggctgtttagcgctgatcgccgat
cctgcgctgtctatcgaacagttgatggaacatattccaggtccagacttcccaacggcg
gcgattatcaatggccgtaaaggcattatcgatgcgtataagacgggccgtggccgcgcc
gttatgcgcgcgctggctgaagtcgaaaccgaagataatggtcgtgaacgcattatcgtt
accgagatcccttatcaggttaacaaagcgaaactcatcgagaaaatcgccgagttagtc
aaagataagaagattgaaggcattagcggtctgcgcgatgagtctgataaagacggtatg
cgcatcgttatcgaaattaaacgcggcgaagtgggtgaagttgtcctgaacaacctctat
gcccaaacacaaatgcaatgttctttcggtatcaacatggtggcgttgaccaatggtcaa
cctaagctattcaaccttaaagagatgctggaatgctttattcttcaccgtcgtgaagtg
gtaacgcgtcgtacagtatttgaattgcgtaaagcccgtgatcgtgcccatatccttgaa
gcactagccattgcgctggctaatatcgaccctattatcgcgctgatcaaggcatcgccg
acaccagccgaagctaaagtgaaactggttgagcaaggttgggcacttggcaatgtacag
ggcatgcttgaaaaagcgggtgacgatgcggcgcgtccagaatggttagagccagaattc
ggtatccgtgatggcttatattacctgactgagcaacaggctcaggcgattctagagctg
cgtttacaccgtttaactggtcttgagcacgataagatcatcgccgaatacgaagagttg
ctcgagttcatcgcgggtctgctgtttattctgcgcagccctgagcgtttgatggaagtg
atcaaagaagagttagaagaaattctggctgaatacggtgatgctcgccgtactgtcatc
aacgccaatgaaattgatatgagtcttgaagacttaatcaacgaagaagacgtggttgtg
accctgtcacacttaggttacgccaaataccaaccgctgagcgattaccaagcccagcgc
cgtggtggtaagggtaaagctgcaactaaggtgaaagacgaagatttcgttgaaaaactg
ctggttgccaacactcacgataccattctgtgcttctcagatttcggtaagatgtactgg
ctcaaggtctatcaattaccgctggcgagccgtacttcccgtggtcgtccgattgttaac
ttgctgccgctgtccgatggcgaacgcattactgcgattctaccggtgcgtgaatacgca
gaagataagtacatcatcatggcgacctctaacggtaccgtgaagaaaactgcgctgaca
gcttacagcaacccacgtgctaatggcattatcgccgtgaacctgaaagacggtgaccaa
ctgatcggtgtcgatatcaccaatggtgatgatgagatcatgttgttctcgaacgaaggt
aaagtggttcgctttaaagaaggcgaagaagtggccgtgctcgatgaaaacggcaaccca
gtgctggacgaagaaggcaacccacaaatcaacttcaagggtgtgcgtccaatgggtcgc
ggcgcgactggtgttcgcggtatcaagcttgaagaaggtcaaaaagtggtgtctctcatc
gtacctaagggcgatggcgctatcttaaccgtgaccgaaaacggctatggcaaacgtact
gaactgtctgaatacccatcgaagagccgcgcgactaaaggtgtggtatcgatcaaggtg
agtgagcgtaacggtgcggttgttggcgcggtacaagttggcggcaatgatgaaatcatg
ctgatcagcgataaaggtaccttagtccgtacgccggcgaacggtgtgtcaatcatcggc
cgtaacactcaaggtgtgaccattatccgtaccgcaagtgacgaaaaagtagttggtctg
caacgtatcgatgagatccaaggcgacgaagatgaagtcgagctggatgaaaacggtatg
ccaatcgtcccagttgtcgctgaaggtgactctgttcatgaagagtctttagaggatgaa
ctggaagaagaattagatgaagacgaagagcttgacgacgagcaagacgaagactaa
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