Shewanella seohaensis: N7V09_13915
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Entry
N7V09_13915 CDS
T08778
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sseh02000
]
N7V09_13915
Transporters [BR:
sseh02000
]
Other transporters
Pores ion channels [TC:
1
]
N7V09_13915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
UXM80951
LinkDB
All DBs
Position
3095738..3100018
Genome browser
AA seq
1426 aa
AA seq
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MSKPPIHEPNATAQQENQTPEQLSLEQNPTCVQPKTLKLRIWQIFKLCTRIIVYVPLSLL
VLTALLLGTEIGSRITVGLADKFVPDLALTYTSGSLNKDLTLAHASWSMDGIKVELKDLH
LAWQPTCLLQKQLCVNALTASQIDVNIDTEALSSGSTEVDVTPENDQPSELVLPFGIKLD
SAELNNINIAVDKMRFSANHIQTAATWFAEGLTVEQLSSEGLAVLIPTDDSPAPDTQATV
PQVDSTQVTDTKAAETAATSAAETTTAAASTQPETEKSATIAATGSAKASADKPIVGNDS
EKTAANPQADKQTEENADKQASTEEWALAHLPQVFMPFPVDVKHLSLDNSRLQIGPREDL
FSHIELQGQFAKYQLTLEKLLLAHRYGEVSVVGQLALEQDYPLALEVQANVTQVAELPEL
THQQLSLTLSQSVGQLGLHALAKGDVDFSLNGQLTLKDPTLPYKVKLEKVRAQWPLQHAE
YLVSDLNLDSQGSLTQQAATLNGNVITPFHKVLAISSELHHQDAKLDIKQFTAKGELGSV
DVTGELDYAKAITWKAKVLLDNLKLQEITLPETAQTPESTPTKDAKAPSTNTDKPAPATT
NAPTPAPATTTATTNAKASASATSSLPNSLISGQLQTTGRLLDKQWQVALTDTQLSGTMQ
GYPFDITADVSINDKLYISAKGVNAKVLGSTLTLAGETNKTWNLEGKLQVPDFGLWLPQA
SGQLQADINVTGEEKHPQVELTAQLVDLVHQNIKLRESTLKAYYKPLDAHEFALSLKSKA
LQLGSQSLDTVTLGSKGDIQNQKLTLSATGDLGLELGVTSQYDMKKSQLQAQVNKINLAT
PVGRWEIDKDILVGWDQNKSKGNISPFCLVNPNSKVCLDNQVTIGKTGDAQLSYAGNLGK
LLVPVLPNNMQWDGSSSLLANFAWAAGRKPTANVDFNFTPGSIKLKRAKNREVTINYQQL
DFKANLDAKRLLSSISFESEDVASWQSEVTVNVTPDRTLSGYANIKQINLQPLGEFFPQL
NTLEGLLTSRLNFAGTLDAPEVSGNVSLTQGALALTANPTLINKIDMSMDLGGQQASLKG
RWMMGNGLGRVTGDMRWPQGQFSGELAIKGDKLAVIQPPLALLDVSPDLTIAFSSQQLEV
KGVVDVPSGNIKIVQLAEGGVALSEDVVFDDSIAAAQPKASPYAIVADLNINVGNDLKVD
GMGLKGKLQGTLKLQQQAFRPPLLFGDIKVKQGSYKFMGQTLKIRTGEVQFVGPTSVPNL
NIEAIREIKSEDLVAGVRVTGTPARPVVTLFSNPAKEQAEILSYIIKGSGFNSSNNEQNN
SLMMGAALGLGSQVGGGGAINNIGSTATGIIEEFGFSNVQLDTNDEGRVAISGFIGDNLM
VKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTLGQSLDIYYNFNIK
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccccctattcatgagcctaatgcaacggctcaacaagagaatcaaacgcct
gaacaattgtctttggaacaaaatccaacgtgcgtgcagcccaaaacacttaagctgcgc
atttggcaaatatttaaactctgcacgcggattattgtttacgttcccttaagtcttttg
gtgttaactgcattactgctcgggactgaaattggctctcggataactgtgggtttagcc
gataagtttgtgcccgatctggcgctcacctacacctctggctcgttaaataaagatctc
accttagcccacgccagttggtcgatggatgggattaaggtcgagctcaaggatttacat
ttggcatggcaacccacttgcctactacaaaagcagctgtgcgtgaatgccttaacggcg
agccaaatcgatgtcaatatcgataccgaggccttaagctcaggttccactgaagtcgac
gtaacccccgaaaatgatcagccgagtgaactggttctgccctttggcataaagctcgac
agcgccgaactgaacaacatcaatattgcggtcgataagatgcgcttttcggccaatcat
attcaaaccgctgccacttggtttgccgaaggactgacggtcgagcagcttagcagtgaa
ggcttggctgtattaattcctaccgacgacagccctgcgccagacacacaggccaccgtt
cctcaagtcgatagcacacaagtcactgacaccaaggcagccgagacagctgcaacttct
gcggcagaaaccacgaccgcagcggcgagcactcagcctgagaccgaaaaatcagcaacc
atagcggcgacaggaagtgctaaagcttcagcggacaagccaattgtcggtaatgactcg
gaaaaaactgccgcaaatcctcaagcagataaacaaacggaagaaaacgccgataagcaa
gcatctacagaggaatgggcacttgcccatttaccacaggtttttatgcctttcccggtg
gatgtcaagcatctcagtttagacaacagccgtttacagattggtccgcgcgaagatctg
tttagccatatcgagcttcaaggtcaatttgccaagtatcagttaaccctagaaaaactg
ctgcttgcccatcgttatggcgaagtgtctgtggtgggtcaactcgccctcgaacaggac
tacccgctcgcgcttgaggttcaggccaatgtcactcaggttgccgagttgccagaactg
acccatcaacaattaagcctaacccttagccaaagcgtcggacaactcgggctccatgcc
cttgccaaaggggatgtggattttagtctcaatggacaattgaccctcaaagatcccacg
ctgccctacaaggtcaaactggaaaaagtgcgcgcacagtggccgctgcaacatgccgag
tatctcgtcagcgacctcaatctcgacagccaaggctccctcactcaacaggccgcgacg
cttaatggaaatgtcatcacacctttccataaagtgttagccattagcagtgagcttcat
catcaggatgcaaagctcgatattaagcagtttactgcgaagggcgaactaggttcggtc
gatgtgactggtgagctagattacgctaaggcgatcacttggaaagccaaggtactgctc
gataacctgaaattacaggaaatcactctgccggaaactgcacagactccagaatcaaca
ccgacaaaggacgctaaagcgccgagcacaaataccgataagccggcgccggcaactaca
aatgctccaacccctgctcctgcgacaacaactgcaactacaaatgcaaaagcaagtgca
agtgcaacgagcagcttgccaaacagtttaatctcgggccaattgcagaccactgggcgc
ctgttagataaacaatggcaagtggcgctaacggacacccaactgtcaggcacaatgcag
ggttatccgtttgatatcactgccgatgtcagcatcaacgataaactgtatatcagcgca
aaaggtgtcaatgccaaggtattgggttccaccttaaccttagcgggcgaaaccaacaaa
acctggaaccttgagggtaaactgcaagtccccgatttcggtttatggttgccccaagcc
agtggtcaattgcaggccgatatcaatgtcactggggaagagaaacatccacaagtcgag
ttaaccgcgcaactggtcgatctggtgcatcaaaatattaagctcagggagtcaacactc
aaggcttactataagcctttggatgcccatgagtttgccctatcactcaaatcaaaggcg
ctgcaacttggctcacagagtttagataccgtaaccttgggcagtaagggcgatattcaa
aaccaaaaactcaccctcagtgccacaggggatcttgggctcgagcttggcgtcactagc
caatacgatatgaaaaaatcccaactgcaggcgcaggtgaataaaatcaacttggcaacc
cccgtcggacgttgggagattgataaggatattcttgtcggctgggatcaaaataagtcc
aaaggtaatatcagccctttctgtctagtgaatcccaacagtaaggtttgcctcgacaat
caagtgaccattggcaaaactggtgatgctcagctcagttatgcgggcaatctaggcaaa
ctattagtgcctgtattaccaaacaatatgcagtgggacggcagttcttcactgttggca
aactttgcttgggcggcgggacgtaaacccacggccaatgtagactttaattttactccc
ggtagcatcaagcttaaacgagccaaaaaccgtgaagtcaccattaattatcaacagctt
gatttcaaagctaacttagatgctaaacgactcctctcgtcaattagctttgaatcggaa
gatgtcgccagttggcagagtgaggtcacggtcaacgtgacgccggacagaaccttgtcg
ggttatgccaatatcaagcaaattaacctgcaacctttaggcgagtttttcccacagctc
aataccctcgaaggcttgctaaccagcagattaaactttgctggcaccttggatgcgcca
gaagtgtcgggcaatgtgtccttaacccaaggcgccctcgcattgaccgccaaccctacg
cttatcaataaaatagacatgtcgatggacttgggtggccaacaggcatccctcaaaggc
cgctggatgatgggcaatggtttggggcgtgttacaggtgatatgcgctggcctcaggga
caattcagtggcgagcttgcgattaagggcgacaaattagccgtaatccaaccgccactt
gcgctacttgatgtctcgcccgatctcaccatcgcctttagcagtcaacaactcgaagtc
aaaggggttgtcgatgtgccttcgggtaatatcaagatagtccagctcgccgagggcggt
gttgccctgtcggaagatgtggtcttcgatgactctattgccgcggcgcaacctaaagca
agcccctatgccattgtggctgatctgaacattaatgtcggtaacgacttaaaagtagat
ggcatgggccttaaaggtaaactgcaaggaaccttaaaactgcagcaacaggcgttccgc
ccaccactgctgtttggcgatattaaagtcaaacaaggcagctataagtttatgggacaa
accctgaaaatccgtacaggtgaagtgcagtttgtcggcccgacctcagtgcctaactta
aatatcgaagctattcgtgaaattaagagtgaagatctggtcgcaggagtccgtgtcaca
ggcacacctgcccgcccagtggtgaccctgttctctaaccctgctaaggagcaagcggag
atcctgtcttacattatcaaaggcagcggttttaacagcagcaataacgagcaaaataat
tcgttgatgatgggggcggcgctgggcttaggttcacaggtcggcggcggtggcgccatc
aataacattggcagtaccgccacggggattattgaagagtttggcttctcgaacgtacaa
ctggacaccaacgatgagggccgcgtggcgatcagtggctttatcggtgataacctgatg
gtgaaatatggcgttggagtatttaacccagggtatgagatgacggttagatactacctg
ttatcgcaactctatctggaaacagtatcgggcaccttaggccaatctctcgatatctat
tacaacttcaatatcaagtga
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