Shewanella seohaensis: N7V09_13935
Help
Entry
N7V09_13935 CDS
T08778
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sseh01002
]
N7V09_13935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
N7V09_13935
Peptidases and inhibitors [BR:
sseh01002
]
Cysteine peptidases
Family C82
N7V09_13935
Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
N7V09_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UXM80955
LinkDB
All DBs
Position
complement(3101785..3103461)
Genome browser
AA seq
558 aa
AA seq
DB search
MMPVSRLTLNPNTSNRSFSSLKRWPLGALLMGLSLAVIESYAAEPLVTAPLSVEPQTVEL
PVLTTSAEVADPDTAVEQILGQTLLLSLADVSPVFSANYQQLIQWQHRALNNEEQSMLRQ
MKLQLDNYWQYLEVQAECTAPCSSAALIPKDTYFRAVVLKLKQLMALAGSSSWETLILED
KLSPGQESPLIAPIAQRLFLLGFLAEMPSTAFESVADKAALPVSELGSEPVIKSDRISSD
ATNQTETVARTEQAATDNNPMRYDDELVIAIKDFQTQHGLQADGVIGKQTLYWLNQSPYV
RAKLLAKNTLRQQLFTRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLS
SHISSVVLNPQWRVPRTIVRRDILPHIRRDGHYLQDRGFDVYDYDGARVEHSPQEWQELA
SSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVE
ELARWFQTHLVKDTRLWEKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIY
HLEAEFTQAVPASIFYIL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgtgagtcgattaacgctaaatcctaatacatccaaccgcagctttagctca
cttaagcgctggccactcggtgcattgttgatgggactttcgcttgctgtcatagaatcc
tatgctgccgagccactcgtaacagcacctctaagcgttgaaccacaaacggttgagctg
cccgtgctgacgacctccgctgaagtcgctgacccagacactgcagttgagcaaattcta
gggcaaaccttacttttgagtcttgccgatgttagcccggtttttagcgccaattatcaa
cagttgatccagtggcagcatagggcgctgaataatgaggagcaatcgatgcttcgccaa
atgaagctgcaattggataactattggcagtatctcgaggtccaagctgaatgcacggcg
ccatgctcatcggcagcactgatccctaaggatacgtattttcgcgctgtggtcctcaag
ttgaagcaattgatggcgttagcgggatcctcttcgtgggagacactcatcctcgaagat
aagcttagtccagggcaagagagcccgctcattgcgccgattgcacagcgccttttccta
ttaggttttctagcagagatgcctagcacggctttcgagtctgtagccgataaagcagct
ttgccagtatctgaactaggatctgagccagtcattaagtcagacagaatttcgtcagac
gcaacaaatcaaactgaaacagttgcacggactgagcaggctgcaactgataacaatccc
atgcgttatgatgatgaactggttattgcaataaaagactttcaaacccagcatggctta
caggcggatggggtgataggtaagcaaaccctgtattggcttaatcaatccccttatgtt
cgggcaaagctgctggcgaaaaatacccttaggcagcagctttttactcgcaccttacct
gcaagctatctggtgataaacatcccagcatttgagttgcaattcgtcgaggcggggaag
gtgatcctcaattcaaaagtgatagtaggcaaagcatctcggccaacaccgctgctaagt
agtcatatctccagcgtggtgctcaatccacagtggcgcgtgccacgcaccatagtgcgg
cgcgatatcttgccccatatacgccgagatggccattacctgcaggaccgcgggtttgat
gtttacgactatgacggcgcgcgagtcgaacattcgccacaggagtggcaagagttggcg
tccagccattttccctatcgtttagtgcaacgccccggggcgaaaaacgccttaggtcga
tataaatttcatttcgataacagttttagcgtgtatttgcacggaacttctgagccaagt
ctctttaaaaagaccgatagggccttatcatcgggttgcattcgggttgaaaaggtcgag
gagctggcccgctggtttcaaactcacttagttaaagatacgcgcctttgggagaaatta
acgcctaataccactcaatcccaatggttcgcgctgtcagataccatgcctgtctacacg
gtttattggacagcatggcttgatgatgctgggcaaattcaatatcgcaatgatatttat
cacttagaagctgagtttacccaggcggtgccagcatcaattttttacattctataa
DBGET
integrated database retrieval system
