Shewanella seohaensis: N7V09_15950
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Entry
N7V09_15950 CDS
T08778
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sseh03016
]
N7V09_15950 (truA)
Enzymes [BR:
sseh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
N7V09_15950 (truA)
Transfer RNA biogenesis [BR:
sseh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N7V09_15950 (truA)
Prokaryotic type
N7V09_15950 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
UXM81274
LinkDB
All DBs
Position
complement(3567218..3568003)
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AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFETNAIRNEGAWTLGVNANLPDNIAVRWAKEVDDSFHARFSATARRYRYVIYNHNFRP
GILRHGVSHYHGDIDADKMHVAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVRVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggcagtggttatttcggttggcagcgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttatctaaggtggccaacgaa
cccatcagcttgttctgtgcgggacgaaccgatgccggcgttcatgcaacggggcaggtg
gtgcatttcgagacgaatgccatacgtaacgaaggcgcgtggaccttaggggtgaatgcc
aatttgcccgataatatcgccgttcgttgggcaaaagaggtggatgacagtttccatgcc
cgcttttcagccacggccagacgttatcgctatgtgatttacaatcataattttcgcccc
gggatcctacgtcacggcgtgagccattaccacggtgatatcgacgccgataaaatgcat
gttgcggcgcaggcgctgctcggtgagcaggactttaccagttttcgcgcgattcaatgc
caatcgaaaaccccatttcgcaatgtgcacagcgttagagtgacccgtcagggcatgtat
gtgattgtcgatatttctgctaatgccttcttgcaccatatggtgcgaaacattgttggc
tccctgttggaaatcggcctaggcaaccaaccactgacttggatggcggatttgctggcg
cttaaagatcgcaatcaagcggcggccaccgccaaacccaatgggctctatttagtcgat
gtgacatatcccgagcagtatcaactgcctaagttggctttagggccattgtttatgctg
gattaa
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integrated database retrieval system
