Shewanella seohaensis: N7V09_16755
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Entry
N7V09_16755 CDS
T08778
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
sseh
Shewanella seohaensis
Pathway
sseh02020
Two-component system
sseh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N7V09_16755
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N7V09_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sseh03000
]
N7V09_16755
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sseh02035
]
N7V09_16755
Transcription factors [BR:
sseh03000
]
Prokaryotic type
Helix-turn-helix
Other families
N7V09_16755
Bacterial motility proteins [BR:
sseh02035
]
Flagellar system
Flagellar assembly proteins
Others
N7V09_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
bpMoxR
AAA_7
AAA
CUE
Motif
Other DBs
NCBI-ProteinID:
UXM81390
LinkDB
All DBs
Position
complement(3741403..3742836)
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AA seq
477 aa
AA seq
DB search
MMQTDQRILLVGTPSERLSRLCCIFEFLGEQIEIISAEKLSSCLQDTRYRALVLTTDNMS
VEALKSLANQYPWQPILLFGNVGDLQVSNVLGQIEEPLNYPQLTELLHFCQVYGQVKRPQ
VPTSANQTKLFRSLVGRSEGIANVRHLISQVATSDATVLVLGQSGTGKEVVARNIHYLSE
RRDGPFIPVNCGAIPPELLESELFGHEKGSFTGAISSRKGRFELAEGGTLFLDEIGDMPL
QMQVKLLRVLQERVFERVGGTKTINADVRVVAATHRDLESMITSNEFREDLYYRLNVFPI
EMPALSDRKDDVPLLLQELVSRVYNEGRGKVRFTQRAIESLKEHAWSGNVRELSNLVERL
TILYPGGLVDVNDLPIKYRHIDVPEYSIELSEEQQERDALASIFTSEEPVEIPETRFPSE
LPPEGVNLKDLLAELEIDMIRQALEQQDNVVARAAEMLGIRRTTLVEKMRKYGMTKE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaacagatcaacgaattttacttgtcggaaccccatcagagcgcttaagtcgc
ctgtgttgcatttttgaatttttaggtgagcagattgaaatcatctccgccgaaaagttg
agctcttgtctccaggatacccgttatcgtgccttagtgctgacgacagacaatatgtct
gtagaggcattgaaatcactcgctaatcagtacccatggcaacctattttattgttcggc
aacgtcggtgatctgcaagtatcgaatgtgcttggtcaaatcgaagagccattaaactat
ccgcaactcactgaactgctgcatttttgccaagtgtatggccaggttaaacggccgcaa
gtgccaaccagtgcgaatcaaaccaaactattccgtagtttagtgggccgcagtgaaggt
attgccaatgttcgccatttgattagccaagttgcaacttctgacgcgacagtattagtg
ctagggcagtcgggtacaggtaaggaagtcgtcgctcgtaacattcattacttgtctgaa
cgccgtgatggtccttttattccggtgaactgtggtgcgatcccgccagaactactcgaa
agcgaattattcggtcatgagaagggctcttttacgggggctattagctcgcgtaagggc
cgttttgagctcgcagaaggtggcacactgtttctcgatgaaatcggtgatatgcctttg
cagatgcaggtaaaattgctgcgtgtgctgcaggagcgcgtattcgagcgtgtcggtggc
actaagacgatcaatgctgatgtgcgtgttgtcgctgctacccacagagatctcgaaagc
atgatcaccagcaacgagttccgtgaagatctttactaccgcctcaacgttttcccgatt
gagatgcctgctctaagcgaccgcaaggatgacgttcctctactgttgcaagagttggta
agccgagtctataacgaaggacgtggcaaggttcgctttacccaacgtgcgattgaatcg
ttaaaagagcacgcttggtcgggtaacgtacgtgaattgtcgaacttggttgagcgttta
acgattttatatcctggcggtttagtcgatgtgaatgacttgcctatcaagtatcgccat
attgatgtgccagaatacagcatcgaactcagtgaggaacaacaggaacgtgatgcgcta
gcatccatcttcactagtgaagagccggttgaaatccctgaaacccgtttcccaagtgaa
ttaccgccggaaggggtcaaccttaaggatctgctggctgagcttgaaatcgacatgatt
cgtcaagcgttagagcagcaggataacgttgttgcgcgcgcggcagaaatgctcggtatt
cgtcgtactactttggttgagaaaatgcgtaagtacggaatgacgaaagaatag
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