Shewanella seohaensis: N7V09_17040
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Entry
N7V09_17040 CDS
T08778
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N7V09_17040 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sseh01007
]
N7V09_17040 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sseh03016
]
N7V09_17040 (hisS)
Enzymes [BR:
sseh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
N7V09_17040 (hisS)
Amino acid related enzymes [BR:
sseh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
N7V09_17040 (hisS)
Transfer RNA biogenesis [BR:
sseh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N7V09_17040 (hisS)
Prokaryotic type
N7V09_17040 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
Motif
Other DBs
NCBI-ProteinID:
UXM81436
LinkDB
All DBs
Position
complement(3807545..3808822)
Genome browser
AA seq
425 aa
AA seq
DB search
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRASVAAYGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAAYREA
LIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQSILGDAPALMDYLGEESSQHFAQL
RELLDAVGIQYRVNPRLVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDT
PAVGFAMGLERIVLLLETLELTQDIPAAVDVYVAAMGDSCLVEAIKVAQELRSTLPTLRV
MSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFL
AELTK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaacgacattctgccaactcaaagtcct
ctatggcaaaaagtggaagcggtactacgtgcgagcgtggctgcttatggttacagtgag
atccgcactccaatagtggaaaataccgatctttttaaacgctctatcggtgaagtgact
gatattgttgaaaaagaaatgtataccttcgaggaccgtaacggtgacagtttaacccta
cgtcctgaaggcacagcctcaaccgtgcgtgccggtaatgagcatggtctgctctataac
caagaacaacgcctgtggtacatgggcccaatgttccgccacgaacgtccgcaaaaaggt
cgttatcgccaattccaccagtttggtgtggaggtctacggcattggtagcgccgatatc
gacgctgaagtgttgatgttatcggcccgtctatgggaaaaactcggcattagcgagcat
gtgacgcttgagctaaacaccttaggtgaccctgctgagcgcgccgcttaccgtgaagcc
ttgattgccttcttagagcaacacaaagacaaattagacgaagatagccagcgccgtatg
tacagcaatccgctgcgggtactggactcaaaagatcctcaagtgcaaagcattttaggt
gatgcgcctgcgctgatggattacttaggtgaagaatcttcacaacattttgcacaattg
cgtgaactccttgacgcagttggcatccaataccgagttaacccgcgcctagtccgtggt
ttggattattataatcgcacggtttttgaatgggttaccaatagcttaggctctcaaggc
actgtacttgcgggcggtcgctacgatggtttagtcgctcagttgggcggtaaagatacg
cctgctgtcggttttgcgatgggattagagcgcatcgttctgctgcttgaaaccttagag
ctgacccaagatatccctgcggctgttgatgtttacgtcgcagcgatgggggatagctgt
ttggttgaagccattaaagtggcacaggagttacgctcaaccttaccgacactgcgtgtt
atgagccactgcggcggcggtaacttcaagaagcaaattaagcgtgccgataaaagcggc
gcacaagtagccttactcatcggtgaagaagaactcgccgaaggtgtggttaccgttaaa
tatttacgcaatgacaacgaacaacaacgggtcgctcgaaatgcactaagcgcattttta
gctgaacttaccaaataa
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