Shewanella seohaensis: N7V09_17780
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Entry
N7V09_17780 CDS
T08778
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00260
Glycine, serine and threonine metabolism
sseh00460
Cyanoamino acid metabolism
sseh00630
Glyoxylate and dicarboxylate metabolism
sseh00670
One carbon pool by folate
sseh00680
Methane metabolism
sseh01100
Metabolic pathways
sseh01110
Biosynthesis of secondary metabolites
sseh01120
Microbial metabolism in diverse environments
sseh01200
Carbon metabolism
sseh01230
Biosynthesis of amino acids
sseh01240
Biosynthesis of cofactors
sseh04981
Folate transport and metabolism
Module
sseh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N7V09_17780
09102 Energy metabolism
00680 Methane metabolism
N7V09_17780
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N7V09_17780
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N7V09_17780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N7V09_17780
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N7V09_17780
Enzymes [BR:
sseh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N7V09_17780
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UXM81550
LinkDB
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Position
complement(3952143..3953396)
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTSWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggttaccct
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggttcgccagtaaacttctccggtagactgtac
aacatcattccttacggcatcgatgaatcaggtaagatcgactatgacgaaatggaacgt
ctggcggttgaacataagcctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgtgaaatcgcagacaaaatcggtgcttacctgtttgtcgac
atggcgcacgttgcgggtcttatcgccgcgggtgtgtatccaaaccctgtgccacacgcg
cacgttgtgacctcaactactcacaagaccttagccggtcctcgtggcggtatcattctg
tctgctgcagatgatgaagagttatacaaaaagctgaactctgcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtagccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtttctggcggtactgacaaccacttaatgcta
gtggacttaatcggtcgcgacctgacgggtaaagaagccgacgccgctttaggtagcgcg
aacatcacagtaaacaaaaactctgtgccaaatgacccacgttctccattcgtgacctct
ggcgtgcgtatcggtacgcctgcgattactcgccgcggctttaaagaagctgaagcgaaa
gagttaaccagttggatctgtgacatcctcgacgatgctcacaacccagcggttatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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