Shewanella seohaensis: N7V09_18790
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Entry
N7V09_18790 CDS
T08778
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sseh03009
]
N7V09_18790
Enzymes [BR:
sseh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
N7V09_18790
Ribosome biogenesis [BR:
sseh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
N7V09_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UXM81708
LinkDB
All DBs
Position
4176015..4176725
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AA seq
236 aa
AA seq
DB search
MRLAKYLAQCGISSRREACRLIEAGRISLNGKIAKHTDAVHVDADGQCLDSLCLDEKPIS
GAEALTYWIFNKAIGTDCRLLDADKSSLLHLLPTTPRLYPVGRLDKDSRGLLLLTNDGEL
THKLMHPSFAHSKTYHVQLDRPFNDAFIEQMASGVQYKEVRTLPCQVTRLSDVSFEIVLT
QGLNRQIRRMSNALGYKVIDLQRVALMTLTLGPLAEGDMRPLSPEEITALKAAVTI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgccaaataccttgcccaatgcggcattagttcacgccgcgaagcctgccgc
ttgattgaggccggacgtatcagcctcaatggcaagatagccaagcatactgatgccgtg
catgtcgatgctgacggccaatgtcttgatagcctctgcttagatgaaaagcccatttcg
ggcgccgaagcgcttacctattggatcttcaataaagccataggcacagattgccgtttg
ttagacgccgataagtccagtttgctacatttactgccaaccacgccaagactctaccct
gttggcagattagataaggattcccgtggcttattgctgctcaccaacgatggcgaactc
acccataaactgatgcaccctagttttgctcacagtaaaacttatcatgtgcaactcgat
agacccttcaacgatgcctttatcgagcaaatggccagcggcgtgcaatataaagaggtg
cgcacactcccctgccaagtcacgcggttaagtgatgtgagttttgaaattgtgcttacc
caagggttaaatcgccagattcggcgcatgtccaacgccttaggttataaggtgattgac
ttacaacgcgtcgcgttaatgacattaacgctaggccccttagccgaaggcgacatgcga
ccactcagtccagaggaaattacagcgcttaaagccgctgtgacaatttag
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