Shewanella seohaensis: N7V09_20360
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Entry
N7V09_20360 CDS
T08778
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00550
Peptidoglycan biosynthesis
sseh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N7V09_20360 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sseh01003
]
N7V09_20360 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
N7V09_20360 (mrcB)
Enzymes [BR:
sseh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
N7V09_20360 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N7V09_20360 (mrcB)
Glycosyltransferases [BR:
sseh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
N7V09_20360 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sseh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
N7V09_20360 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
UXM81973
LinkDB
All DBs
Position
complement(4534777..4536966)
Genome browser
AA seq
729 aa
AA seq
DB search
MTFYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHPQLMAELKLLGYRKVANP
REVGEFSASSTKIELWRRPFLHPEGDQAEQRVMISFDSDGISSIARMSDKRQLAVFHLEP
VLLDRIIAGDGEDRLFVPTEEMPKAIVKALLLVEDRSFYEHHGVNPFAILRAAFVNISAG
RTVQGGSTLTQQLAKNFFLSSERSLLRKIREALMAVIIDFRYSKEEILEAYLNEVYMGQD
KSRAVHGMGLASQFYFGRPIGELTTAQQAFLVAAIKGPSYYNPWRYPERSQERRDLVLRL
LMESGELSTAQYKVAVESPLGLRNPNKPVHQKLPAFYALVKQELNERYGDALLKQSGVKI
YTTLDPMAQEAAEIAVTQTFKSLDKGNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNR
AVEIRRPIGSLIKPFVYATALAPNSQFTLASPLKDQPITLKNEQGKTWSPQNFDKKFSGQ
VSLLTALKKSMNVPTVNLGIAVGVDAVATTLAKSGWQDPLNEYPSMLLGAVNGSPLMVAQ
VYQTLADSGAYRKLTTVTAVLDSHNQPLPVTRSPKEQAITPDTDFLVQYAMQQVVRSGTA
TRLGNAFPGVALAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMAVY
QAFLKERPPIGLRSIPPTGVIQGYFDRDTGEAKEAGCRNTEALPALRGTYNPAKNCGEPL
QWWQKILGQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttctacagtatttacctcgatcaaattattgcccgcaagtttgaggggcaaaaa
tggcacttacccgcgcaggtatttagccgctcgatggccttatatcccggcgctgccgtg
agtcatccacagttaatggccgaactcaaactcttgggctatcgcaaagtcgccaatccc
cgtgaggtcggtgagttctctgcatccagcaccaaaatcgaattatggcgtcgtcccttc
ttacatcccgagggcgatcaagctgagcagcgggtgatgattagcttcgacagcgatggg
atcagctcgattgcacgtatgtcagataagcgccagttggcggtattccatttagagccc
gtcttgcttgaccgcattattgcgggggacggcgaagacagattgtttgtccctacagaa
gaaatgcctaaggcgattgtaaaagccttgctgctggtggaagaccgcagtttttacgaa
caccatggggtcaaccccttcgcgattctgcgcgccgcttttgtgaatatcagtgcgggt
cgtaccgtacagggcggttcgacactgacccagcagttggcgaaaaacttcttcctctca
agcgagcgctctttgctgcgtaaaattcgcgaagccttaatggcggtgattatcgatttt
cgttacagcaaggaagaaatcctcgaggcctacctcaacgaagtgtatatggggcaagat
aaatcccgcgccgtgcatggtatggggctggcttcacagttctattttggtcgacccatc
ggcgagctaaccacggcgcagcaagcgtttttagtggcggcgattaaggggccttcctat
tacaacccatggcgttatcctgagcgcagccaagagcgtcgcgatttagtgctgcgtctc
ttgatggagtcgggtgagctgagcaccgcgcaatacaaggtcgcggtagagtcgccccta
ggcttacgtaatcccaataaaccagtgcatcaaaaattacctgcattctatgccttggtt
aaacaagagcttaacgagcgttatggcgatgcgttactaaaacaatctggggtgaagatt
tacaccacactcgatccaatggcgcaggaagccgccgaaatcgccgtgactcaaaccttt
aagagcttagataaaggcaataagtcgttgcagattggtatggtcgtgacggataaatac
actggtggtatcgcggctatggtgggtgataagacgcctggctttgacggttataaccgc
gcggttgagatccgccgacccattggctcgctcatcaagccatttgtgtatgcgaccgca
ttggcaccgaatagccagtttaccttggcttcgccacttaaagatcagccgattacccta
aagaatgagcagggtaaaacctggtcaccgcagaactttgataagaagtttagcggacaa
gtctccttgttaacggcactgaaaaagtcgatgaacgtacctacggtgaacctcgggatt
gccgtgggggtggatgcggtggcaaccacgctggctaaatctggctggcaagatccgctt
aacgaatacccgtctatgctactgggcgccgtgaatggctcgccgttaatggtggcgcag
gtttatcagacactggccgatagtggcgcctatcgtaaactcactacagtgacggcggtg
ctcgatagtcacaatcagccgttgccagtgactcgctcaccgaaggaacaagctattacg
ccggatactgatttcttggtgcaatatgccatgcagcaagtggtacgctcgggtacagca
acgcgcttaggcaatgccttccccggtgtggcgctggcgggtaaaaccggtaccagtaac
gatagccgcgactcttggttcgccggttttgacgagcgtaacgtcgcggcgatttgggtc
ggacgcgacgataacggcaagaccagcctctacggtagcagtggcgccatggcggtgtat
caagccttcttgaaggagcgtccaccgattgggctgcgctcgattccgccaacgggcgtg
atccaaggttactttgaccgtgataccggtgaagctaaggaggcgggatgccgcaatacc
gaggcattgccagcccttagaggtacctataatcctgcgaaaaactgcggcgagccgttg
cagtggtggcagaagattttaggtcagtaa
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