Shewanella seohaensis: N7V09_20900
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Entry
N7V09_20900 CDS
T08778
Name
(GenBank) efflux RND transporter permease subunit
KO
K15726
heavy metal efflux system protein
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sseh02000
]
N7V09_20900
Transporters [BR:
sseh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
N7V09_20900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6249
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UXM82066
LinkDB
All DBs
Position
complement(4652673..4655885)
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AA seq
1070 aa
AA seq
DB search
MLQKAIEAAIKNRLLVVLALLAVVAASVAMLPKLNLDAFPDVTNVQVTINTAAEGLAAEE
VEKLISYPVESAMYALPAVTEVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAAREM
IPSGVGVPEIGPNTSGLGQIYQYILRADPSSGINAAELRSLNDYLVKLIMMPVGGVTDVL
SFGGEVRQYQVQVDPNKLRAYGLSMAQVSEALESNNRNAGGWFMDQGQEQLVVRGYGMLP
AGEAGLAAIAQIPLTEVRGTPVRVGDIAKVDFGSEIRVGAVTMTRRDEAGQAQALGEVVA
GVVLKRMGANTKATIDDIDARINLIEQALPKGVSFEVFYDQADLVDKAVTTVRDALLMAF
VFIVVILALFLVNIRATLLVLLSIPVSIGLALMVMSYYGLSANLMSLGGLAVAIGMLVDG
SVVMVENIFKHLTQPDRRHLAQARSRADGEVDPYHGDEDGCAHALDADNSMAVRIMLAAK
EVCSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAVSIILAMISALLVALIAVPALAVYL
FKRGVVLKESVVLAPLDSAYRKLLSATLARPKLVMISALLMFAMSMVLLPRLGTEFVPEL
EEGTINLRVTLAPTASLGTSLDVAPKLEAMLLEFPEVDYALSRIGAPELGGDPEPVSNIE
VYIGLKPIEEWQSASSRLELQRLMEEKLSVFPGLLLTFSQPIATRVDELLSGVKAQLAIK
LFGPDLDVLSEKGQVLTDLVAKIPGAVDVSLEQVSGEAQLVVRPDRSQLARYGISVDQVM
SLVSQGIGGASAGQVIDGNARYDINLRLAAEYRSSPDVIKDLLLSGSNGATVRLGEVASV
EVEMAPPNIRRDDVQRRVVVQANVAGRDMGSVVKDIYALVSQADLPAGYTVIVGGQYENQ
QRAQQKLMLVVPISIALIALLLYFSFGALKQVLLIMANVPLALIGGIVALFVSGTYLSVP
SSIGFITLFGVAVLNGVVLVDSINQRRQSGESLYDSVYEGTVGRLRPVLMTALTSALGLI
PILVSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLYRWLYRHDKSPA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaaaagcaatcgaagccgcgattaaaaatcggctattagtagtgctggcacta
cttgctgtggtggccgctagtgtcgccatgttgcctaaattgaatctggatgcctttccc
gatgtgaccaacgtacaggtgaccatcaatactgcggccgagggcttggccgccgaagag
gtggagaagctcatcagttatccggtcgaatcggccatgtatgccttgccagcggtgacc
gaggtgcgctcactttcacgtactggcttgtccattgtgaccgtggtatttgccgagggc
acggatatttactttgcccgtcagcaagtgtttgagcagttacaggcggcgcgggagatg
atcccaagcggagtgggcgtgccagaaattggccctaacacttcaggtttggggcagatt
tatcagtacattctgcgggctgaccctagctctggcattaatgccgccgagctgcgtagc
cttaacgattacctcgttaaactgatcatgatgccggtgggcggtgtgaccgatgtttta
tcctttggcggcgaggtacgccagtatcaagtgcaggtcgaccctaacaagctgcgagcc
tatggtttgtcgatggcgcaggtgagtgaggcgcttgagagcaataaccgcaacgctggt
ggctggtttatggaccaaggccaggagcaattggtggtgcggggttatggcatgttaccc
gcgggtgaagcagggcttgccgcgatcgcccaaattccgctgactgaagtccgtggcacg
cctgtgcgagtgggcgacattgctaaggtcgattttggcagtgagatccgtgttggggcc
gtgactatgacgcgccgcgatgaagcgggtcaggcgcaagccttgggcgaagtggtggcg
ggcgtcgtgcttaagcgcatgggcgccaacactaaggcgacgattgatgatatcgatgcg
cggattaatctgattgagcaggcgctgcctaagggcgtgtcctttgaggtgttttacgac
caagcggacttagtggataaagccgttaccacagtgcgcgatgcgctgctgatggccttt
gtgtttatcgtggtgatcttggcgctgttccttgtgaatatccgcgccaccctgttagtg
ctgctgtctatccctgtatccattggtttggcgctaatggtgatgtcttactatggcctg
tctgccaacttgatgtctctcggtggattagcggtggccattggtatgttggtcgatggt
tctgtggtgatggttgaaaatattttcaaacatttaactcagccagaccgtcgccattta
gcccaggcgagaagccgcgccgatggcgaagttgacccatatcatggcgatgaggatggc
tgtgctcatgctttagacgcggataacagcatggccgtgcgcattatgctggcggcgaaa
gaggtttgcagtccgatcttcttcgcgaccgccatcatcattgtggtgtttgcgccgtta
tttgcgctggaaggggttgagggcaaactgtttcagccgatggcggtcagcattattttg
gcgatgatttccgctttactggtggccttgattgccgtgcctgcactggcggtttatctg
tttaagcgtggcgtcgtgctcaaggagagcgttgtcttagcacctttggactccgcctat
cgcaagctgctgagtgcaacacttgctcggccaaagttggtgatgatcagcgcgctgctg
atgtttgccatgagtatggttttgctgcccaggctggggaccgagttcgtgcccgagcta
gaggaaggtacgattaaccttagggtgacgctggcaccgaccgcgagccttggcacttct
ttagatgtagcgccaaagcttgaggccatgttgctggagttccccgaggtggactatgcc
ttgagccgtatcggcgcgcctgaattaggcggcgatcctgagcctgtcagcaatatcgaa
gtctatatcggccttaaacccatcgaagaatggcaatcggctagctcgcgtttggagctg
caacggttaatggaagaaaagctcagtgtcttccccggactgctactcaccttctcacaa
ccgattgcgacgcgggtcgatgagttgctctctggggtaaaggcgcagctggcgatcaag
ctgtttggccccgatttagatgtcttatcagaaaagggacaagtgctcaccgatctggtg
gcgaaaattcccggcgccgtggatgtgtcactcgagcaggtcagtggtgaggcgcagctg
gtagtgcggccagaccggtcgcagcttgcccgttatggcatcagtgtcgaccaagtgatg
tcgctagtcagccaagggataggcggtgccagtgccggacaggtaatcgacggtaacgcg
agatacgacatcaatttgcgcctcgcagccgagtatcgcagcagcccggatgtgattaag
gatttactccttagcggcagtaatggtgccacagtgcgtttaggtgaggtggccagcgtt
gaggtggaaatggcgccgccgaatattcgccgtgatgatgtgcagcgccgcgtggtggtg
caagccaacgtggcggggcgggacatgggatctgtggtcaaagatatctatgcgctagtg
tctcaggccgatttgcccgcaggatacacggtaattgtgggtggtcagtacgagaaccag
cagagggcacaacaaaagctgatgttggtggtgcctatctctatcgctttgattgccttg
ctgttgtacttctcctttggtgcgctgaagcaggtcttattgatcatggcaaacgtgcct
ctggcattgatcggcggtatcgtggcgctgtttgtcagcggcacttatctatcggtgcca
agctccattggttttatcacgctgtttggggtggcggtactcaatggtgtggtgttagtg
gactcgattaatcagcgcaggcagagcggcgagtcgctctatgactcggtttacgaaggc
acggttggccgtttacgcccagtgctgatgacggccttgacttcggccttgggcttgatc
cccatcttagtgtcatcgggtgtgggcagtgaaatccaaaagccgctggcggtggtgatt
atcggcgggctgtttagctctacggcactgacgttattggtgttaccgaccctgtatcgc
tggttatatcgccacgataagtcgcccgcctag
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