Sulfurimonas sediminis: FJR45_02810
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Entry
FJR45_02810 CDS
T07337
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR45_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssei03019
]
FJR45_02810
03009 Ribosome biogenesis [BR:
ssei03009
]
FJR45_02810
Enzymes [BR:
ssei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FJR45_02810
Messenger RNA biogenesis [BR:
ssei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJR45_02810
Ribosome biogenesis [BR:
ssei03009
]
Prokaryotic type
rRNA helicases
FJR45_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Imm30
Motif
Other DBs
NCBI-ProteinID:
QOP42937
UniProt:
A0A7M1AZK0
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All DBs
Position
complement(503139..504686)
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AA seq
515 aa
AA seq
DB search
MQENAQETTTTQEPTITFDSLNLKPEILKSVKFAGFTVPSPIQKQAIPIILEGRDMVGQA
HTGTGKTAAFSLPVLSNMKLNGKVEMLVITPTRELATQVSDEIFKYGRNLNVKTVTVYGG
SSYKRQLDLISRGASVVVATPGRMLDLLKRNMLNNFAPSVVVLDEADEMLDMGFLDDITE
IFSYLPTDRQTLLFSATMPQPIKNLANKILKDPAFVSITKGETTNTDIEQEYYVIDEHER
DDAIIRLMDSENSTKSVVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQRETVIKGFK
NDSVKVLVATDVAARGIHVSNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPL
EFKELQRIKQKVGTSMNHAFVPSKNDLRESTVEKMVKTIEDQKIYDEAHKILDRLKEDID
EEKIMFKLISMILDRQDIKGPSNIGIPADKLAAILERAGKRNDSRGKGGRGRGGFRGNSR
NRSGSDRNRSGGDRNRDGGGYRGNRSSSNRNRNRD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatgcacaagaaacaacaactacccaagaacctacaatcacatttgattct
ttaaacctcaaaccagaaatacttaaaagtgttaaattcgccggctttacagttccctca
cctattcaaaaacaggcaatccctatcattcttgaaggccgtgatatggtaggacaggca
cacacaggtacaggaaaaacagcagctttttcacttcctgttctttcaaacatgaaactc
aacggtaaagttgaaatgcttgtcatcacaccgacacgagaacttgctacacaggtcagt
gatgaaatattcaaatacggccgtaatctgaatgtaaaaacagttacagtatacggggga
agctcttacaagcgccaacttgatcttatcagtcgcggtgcgagtgttgttgtggcaaca
ccgggaagaatgctagacctgttaaaaagaaatatgctcaacaattttgcaccgagtgtt
gttgtgcttgatgaagcagatgaaatgcttgacatgggatttttggatgacatcactgaa
attttttcttatcttccaacagacagacagactctgctcttttcggcaactatgccacag
cctattaaaaaccttgcaaacaagattttaaaagatcctgcttttgtttcaataacaaaa
ggagaaacaacaaatacagatattgaacaagagtattatgtgattgatgagcatgaaaga
gatgatgcgattattcgtcttatggactcagaaaacagtacaaaatcagttgtcttttgt
agaacaaaaagtgaagttgacagactcagcaatgttctttccaatgcgggatatttggca
aacggattgcatggtgatatggaacagcgccaacgtgaaacagttataaaaggctttaaa
aatgactctgtaaaagtgcttgtggcaactgatgttgctgctcgtggtatacatgtaagc
aatatatcacatgtatttaactaccatattccgtttgatccggagtcttatgttcaccga
attgggcgaacaggtcgtgcaggaacaaaaggaaaggctatcacgcttttgacacctttg
gagtttaaagagttacagcgtatcaagcaaaaagtcggtacctctatgaatcatgctttt
gtaccgagtaaaaatgatttacgtgaatcgactgtagaaaaaatggtcaaaacaattgaa
gaccaaaaaatatatgatgaagcccataaaattcttgaccgtctcaaagaagacatagac
gaagaaaaaattatgtttaaactcatctctatgattcttgacagacaagatataaaagga
ccaagcaatatcggtattcctgctgacaaactcgctgctatcttggaacgtgccggaaag
cgcaatgacagtcgaggaaaaggcggcagaggccgtggcggattccgaggaaacagtcgt
aaccgttctggcagtgacagaaaccgttctggtggcgatagaaaccgtgacggtggcgga
taccgtggcaacagaagttcatcaaacagaaacagaaacagagactag
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