Sulfurimonas sediminis: FJR45_05815
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Entry
FJR45_05815 CDS
T07337
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ssei
Sulfurimonas sediminis
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssei03016
]
FJR45_05815 (truD)
Enzymes [BR:
ssei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FJR45_05815 (truD)
Transfer RNA biogenesis [BR:
ssei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FJR45_05815 (truD)
Prokaryotic type
FJR45_05815 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QOP43494
UniProt:
A0A7M1B199
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All DBs
Position
1086872..1087948
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AA seq
358 aa
AA seq
DB search
MDRFYSLAHASIDFHFKQTPRDFVVEEIPLYEFSGEGEHLILQVRKKNLSTNEMIGQIAR
YLGIKNKEIGYAGLKDKNAMTVQYISLHKKYEEALENFNFDGIKILSKTYHNNKLRIGHL
KGNRFYIKLKKVNPTSAEKIDEALKNIDKFGLPNFFGYQRFGNDGDNHILGEKLAKGEAR
ERNPRVKRLLINAYQSYLFNLWLSRRLEINTLVNSFKAQEIESLLNMPNEEVKKMKEQKH
PFKLISGDVMEHYPHGRLFDFEGAKEDLERFNARDISVTGLLCGKKVRHATEIAGEIEKD
YDDEINADGARRYAWVFPTEIEGRFNKQEAQYEMNFTLPKGSYATVLIEEIAKRKINE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacagattttattcacttgcgcatgcaagtattgattttcactttaaacagactccc
cgtgattttgtagttgaggagatacctttatatgaattttcgggagaaggggagcattta
atactgcaggtaagaaagaagaacctctctacaaacgaaatgataggacaaattgcccgt
tatctgggtataaaaaataaagaaataggctatgcggggcttaaagataaaaatgccatg
acagtgcagtatatctctttgcataaaaaatatgaagaggctttggaaaattttaatttt
gacggaataaaaattctttcaaaaacctatcataacaacaagttgagaatagggcatcta
aaaggcaatcgtttttatataaaactgaaaaaggtcaatcctacaagcgctgaaaaaatt
gatgaagcattaaaaaatatagacaaattcgggttgccgaattttttcgggtatcaaaga
ttcggaaatgacggagataaccatattctgggagaaaaattggcaaaaggagaggcaaga
gaacgcaatccgagagtcaaacgccttttgataaatgcctatcagagttatctgtttaat
ctttggctctcaagaagacttgagatcaatacgcttgtgaacagttttaaggcgcaagag
attgagagtctgttaaatatgccaaacgaagaagttaaaaagatgaaagagcagaagcat
ccttttaaacttatcagtggtgatgtcatggaacactatccgcacggaagactttttgac
tttgaaggcgccaaagaagatttagaaagatttaatgcacgcgacatctctgttacagga
cttttatgcgggaaaaaagtacgccatgccacagaaattgcaggagagattgaaaaagac
tatgatgatgaaatcaacgctgacggggcaagacgctatgcctgggtctttccaacagag
atagaagggcgtttcaacaaacaagaagcacagtatgaaatgaactttacactccctaaa
ggttcatatgccacagttttaatagaagaaattgcaaaaaggaaaataaatgaataa
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