Sulfurimonas sediminis: FJR45_07780
Help
Entry
FJR45_07780 CDS
T07337
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei03420
Nucleotide excision repair
ssei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR45_07780
03430 Mismatch repair
FJR45_07780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssei03400
]
FJR45_07780
Enzymes [BR:
ssei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJR45_07780
DNA repair and recombination proteins [BR:
ssei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJR45_07780
MMR (mismatch excision repair)
Other MMR factors
FJR45_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOP43855
UniProt:
A0A7M1B2H8
LinkDB
All DBs
Position
complement(1447462..1449543)
Genome browser
AA seq
693 aa
AA seq
DB search
MPLSRLNEEQYAAATSPHSKNLIIASAGTGKTSTIVGRIGHLLNNGVAPNEILLLTFTNK
AAAEMVARVAEYFGAGVAKKIDAGTFHAVSYRWLKKRDKRVVLKQQRELKTLFRSVFEKR
SFMHIEAEVQPYGGNYLYDLYSFYQNTELKNNFEDWLIENYPEHELFAMIYADIVDEFEA
LKKEYGFLNFNDLLLNFREMCKNDELGYKEVLVDEYQDTNALQGTLIDAMNPPSLFCVGD
YDQSIYAFNGADIGIIGSFTTKYPDAVVHTLTKNYRSSVPILSLANKVIEHNERIYPKKL
EVTRIYDAQAPKLLAFDELFDQYHAMAAMIRDTSTPREEIAVIFRNNSSADGIEVGLREL
DIPCKRKGGTSFFDSREIKAILDLYTLLVNESDMMAFIHLFEFARGIGSAMAKELYTALK
YLGQGSIFYGLYAPDESVKNPFEKRKLNHQLGLFDDFLELGAVGKYAKLGFEAKFMKNPV
LKHPKLTKESATFLHNFYLLFRDLKGIKQPKTVVKKIANSALYMYIADVLATKRATLKDG
SVDEKQKTEALSRIQRKTLLLEELSKPYSEHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYVIDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLSYAKYDKIKKQ
NFVPSQFLYEAGMVAKDEAYRKMVMQAEEKEQE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtcgagattaaatgaagaacaatatgccgctgcaacatctcctcacagcaaa
aatctcatcattgcttctgccggaacaggaaaaacttcgactattgtaggaagaatagga
catttgctcaacaatggcgttgccccaaatgaaattcttctgctgacttttacaaacaaa
gcagctgcagagatggtggctcgggttgcggagtatttcggtgcgggtgttgccaaaaaa
atagatgcgggaacttttcatgcggtaagctacagatggctgaaaaaaagagacaaaaga
gtggtgctcaagcagcagcgagagctcaaaacactttttcgttctgtttttgagaagcgt
tcctttatgcatatagaagcagaagtacagccttacggcggaaattatctgtatgatttg
tactctttttatcaaaatacagagctgaaaaacaattttgaagactggcttatcgagaac
tatccggagcatgaactttttgccatgatatatgcagatatagtggatgaatttgaagcc
ttgaaaaaagaatacggttttttaaattttaatgatctgcttttgaattttagagaaatg
tgcaaaaatgacgagctgggatataaagaggttttggtggatgagtatcaagacaccaat
gctctgcagggaacgctcatagatgccatgaatccgccttcgctcttttgtgtgggagat
tacgaccagagtatttatgcttttaacggcgcagatataggcattataggctcttttacg
acaaaatatcccgatgccgttgtgcatacgctgacaaaaaactaccgatcttccgtgcct
attctctcacttgcaaacaaggtgatagagcataatgaacggatttaccctaaaaagctg
gaagtgacccgtatttatgatgcacaggcgccaaaacttttggcatttgatgagctgttt
gaccagtatcatgccatggctgcgatgattcgtgacacatccacaccaagagaagagata
gcagtcatctttcgtaacaactcttcggctgacggcatagaggtaggactgcgtgagctt
gacattccctgcaagcgtaaaggcggcacaagcttttttgattcgcgtgagattaaagca
attttagatttatacactctgcttgtgaatgagtcggatatgatggcatttattcatctg
tttgaatttgcacggggcataggttctgccatggcaaaagagttgtatactgctcttaaa
tatttggggcaggggagtattttttacggactttatgcacctgatgaatcggtgaaaaac
ccttttgaaaaacgaaagctcaaccatcaacttgggctttttgatgactttttggaactc
ggtgctgttgggaaatatgcaaaactcggctttgaagcgaaatttatgaaaaatccggtg
ctcaaacatcctaaactgacaaaagagagtgcgacttttttgcataatttttatctgctt
tttcgtgatttgaaagggattaaacagccaaaaaccgtggtaaaaaaaattgcaaattcc
gcactttacatgtatatagccgatgttttggcaacaaaaagagccacgctcaaagacggc
tctgttgatgagaaacaaaaaacagaagctttgagccgaatccagagaaaaacactgctt
ttggaagaactttcaaaaccttattcggagcatgaacgctttttaaatgcgatgatttta
ggctcatccgatttgacacagggcgaaggggtaaatctgctgagtgtgcatgcaagtaaa
gggcttgaatacaaagaagtttatgtgatagatttgatggacggacgctttccaaacaga
aaactgatgcagcggggcggcagtcttgacgaagagcgccgacttttttatgtggcagtc
acacgtgcaaaagacatactctatttgagttatgcaaaatatgacaaaatcaaaaaacag
aactttgtaccaagccagtttttatatgaagccggcatggttgcaaaagatgaggcctac
agaaaaatggtgatgcaggcggaggaaaaagagcaagagtag
DBGET
integrated database retrieval system
