Sulfurimonas sediminis: FJR45_08925
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Entry
FJR45_08925 CDS
T07337
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJR45_08925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssei03400
]
FJR45_08925
Enzymes [BR:
ssei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FJR45_08925
DNA repair and recombination proteins [BR:
ssei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FJR45_08925
Prokaryotic type
FJR45_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOP44059
UniProt:
A0A7M1B2S3
LinkDB
All DBs
Position
complement(1664693..1665376)
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AA seq
227 aa
AA seq
DB search
MLLENEWKNFLNDEIYKEYFIKLLKKVSLEYKSKTVFPNSENIFRAFNLVNPSEVKVVII
GQDPYHGLNQATGLAFSVCPKCNIPPSLKNIYKELVDDIGCKYPKNGDLTQWAKEGVLLI
NAVLTVEQGKANSHKDFGWQKFTDAVIKKLSDEKEHLVFILWGGPSQKKEFLIDTTKHCI
IKSPHPSPLSAYRGFFHSKPFSRANEYLIKHKKKPVAWCLSVEQTLL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttattagaaaacgaatggaaaaattttctcaatgatgaaatttataaagaatatttt
atcaaacttttgaaaaaagtatctttggaatataaatcaaaaactgtgtttcccaattct
gaaaatatatttagagcctttaatttagtaaacccttctgaagtaaaagttgtaattata
ggacaagacccttatcatggtctcaatcaggctaccggacttgcattttctgtttgtcca
aaatgtaatattccaccttcattaaaaaatatatacaaagagttagtcgatgatataggt
tgtaaatatccgaaaaacggggatttgacacaatgggcaaaagagggagttttgttgata
aatgctgttttaactgttgaacaggggaaggcaaactcccataaagattttggctggcaa
aagtttactgatgccgttattaaaaaactctctgatgaaaaagaacatttggtctttata
ttatggggcggcccgtcacaaaaaaaagagtttctaattgatacaacaaaacattgtatt
attaaatctcctcatccttctccgctctcggcatacagaggtttttttcattcaaagcct
ttttccagagcaaatgagtatttgatcaaacataagaaaaagcctgttgcatggtgtctc
agtgtagaacaaactctgctatga
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