Sulfurimonas sediminis: FJR45_11020
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Entry
FJR45_11020 CDS
T07337
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR45_11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssei03019
]
FJR45_11020
03016 Transfer RNA biogenesis [BR:
ssei03016
]
FJR45_11020
Enzymes [BR:
ssei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FJR45_11020
Messenger RNA biogenesis [BR:
ssei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FJR45_11020
Transfer RNA biogenesis [BR:
ssei03016
]
Prokaryotic type
tRNA degradation factors
FJR45_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
QOP44450
UniProt:
A0A7M1B438
LinkDB
All DBs
Position
complement(2077703..2079883)
Genome browser
AA seq
726 aa
AA seq
DB search
MTYDVKLELENRVEEYSFGDVAKQANGSAWLKSGKTVILATVVIDETEIVKDDFLPLTVQ
YIEKTYAAGKIPGGFFKRETKPSDFETLTSRIVDRSLRPLFPKGFGHPTQITIMVFSADA
ESDMQVLALNAASAALFTSDIDINSSVCAVRAAKVDGELVLNPTLSQLKNSTLDLYLSGT
KKDLLMIEMRSIGSEKVEVEETYEPMLDPMMDPSLGTIVVDTHVSNAMPEDELIEVLDKT
EKILFASNVEYEVAFGPYQKEIKPLELKTDGLNEEMVAFVKERHMQDIIDAMNQMAKSER
STALRNLRKRILTNNLEWDELELKAAIEAVKKEQVRAQILNEKVRADGRTLTEIRPISID
TNVLPAAHASCLFTRGQTQALVVLTMGGPKDAQMFEGLTDSGTQNENFMVHYNFPGFSVG
EASPVMGTKRRELGHGNLAKRALEPILNLDGQTVRLVSEILESNGSSSMATVCGGYLALK
AAGLETSDTVAGIAMGMISDGERYAILSDIMGLEDHDGDMDFKVTGSKEGITAMQMDIKL
GGVSLNILKEALYQAKEGRAHIIDIMLDAEAKIEFNDGVLPVTEFFHIDPGFIGEIIGQA
GKTIREMIEKFEVAIDIDKKEGKVKITGKNKNGVEGAKEHIQKIVNAPKKEKIKYEVGGK
YEGTVKKIVDFGAFIELPDGTDGLLHISKLSKDKRVDNVSDILSEGDKVKVEILEFKGNK
ISLGLA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatgatgtaaaattagaattagaaaacagagtggaagaatactcctttggtgat
gttgccaaacaggcaaacggttcggcatggcttaaatcaggtaaaactgtaatacttgcg
acagtagtgattgatgagactgaaattgtcaaagacgattttttgcctctgactgtacag
tatatagaaaaaacatatgcagccggaaaaattccgggaggattttttaaacgtgaaaca
aagccgagtgattttgagaccctgacatcacgaatagtggacagaagtctgcgtcccctg
tttccaaaaggattcgggcacccgacacaaattaccattatggtattttcggcagatgca
gagtctgatatgcaggtccttgctcttaatgccgcttcggctgcactttttacttcggac
atagatataaacagcagtgtatgtgcggttcgcgcagcaaaagtagacggggagcttgta
ttgaatccaacactctcacagctgaagaactctacactggatttgtacctttcaggaacg
aagaaagatttactgatgatagagatgcgttctatcggcagtgaaaaggttgaggttgaa
gagacctacgagccgatgcttgacccgatgatggacccgagtctcggtacaatagtggta
gatacacatgtatccaatgcaatgcctgaagatgaactgatagaagtgcttgataaaaca
gaaaaaattctttttgcttcaaatgttgaatatgaagtggcctttggaccgtaccaaaaa
gagataaaacctctggaactcaaaacagacggtttaaatgaagagatggtggcttttgtg
aaagaacgtcatatgcaagatatcatagatgctatgaatcaaatggcaaaatccgagcgt
tcaactgctttgcgaaacctgagaaaaagaattcttaccaataatctggaatgggatgag
cttgagctcaaagcagccatagaagcagtcaaaaaagaacaggtacgtgcacagatactc
aatgagaaagtaagagccgacggacgtactctgacagaaatacgccctatcagtattgac
acaaatgtattgcctgctgcgcatgcctcttgtcttttcacccgtggacagacacaggct
cttgttgttttaacaatgggcggaccaaaagatgcacaaatgtttgaaggcttgacagat
tcgggcacccaaaatgaaaactttatggtgcattataactttccgggattttcggtaggg
gaagcttctcctgttatgggaacaaaaagacgtgaactcggacacggaaatttagcaaaa
cgtgcgcttgagccgatactcaaccttgatggacagacagtgcgtctggtgtctgaaata
ctggagtcaaacggttcttcttcaatggcaactgtgtgtggcgggtatctcgcgcttaaa
gctgcagggcttgagacaagtgatacggttgcaggtattgccatgggtatgataagtgat
ggagagcgttatgccattctttctgacattatgggtcttgaagatcatgatggagatatg
gatttcaaggttaccggttcaaaagagggcattaccgctatgcagatggatatcaaactc
ggtggtgtaagtctgaacattttaaaagaagcactgtatcaggcaaaagagggacgtgcg
catattattgatattatgcttgatgcagaggctaaaatagaatttaatgacggtgtactc
cctgttacagaattttttcatattgatccgggatttatcggtgaaattataggtcaggca
ggaaagacaatccgtgaaatgattgaaaaatttgaagtggcgatagatatagataaaaaa
gagggaaaagttaaaattaccggtaaaaacaaaaatggtgtagagggagcaaaagagcat
attcaaaaaattgtcaatgcaccgaaaaaagaaaaaataaaatatgaagtaggcggaaaa
tacgaagggactgtgaaaaaaatcgttgactttggtgcttttatagagttgcctgacgga
acagacggcctgttgcacatatccaaactttcaaaagacaaacgtgtggacaatgtaagc
gatattttaagcgaaggcgataaagtgaaggtggaaattttagaatttaaaggaaataaa
atatctttaggtcttgcataa
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