Streptomyces sediminicola: VM636_08725
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Entry
VM636_08725 CDS
T11831
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssel Streptomyces sediminicola
Brite
KEGG Orthology (KO) [BR:
ssel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssel03032
]
VM636_08725
03036 Chromosome and associated proteins [BR:
ssel03036
]
VM636_08725
03400 DNA repair and recombination proteins [BR:
ssel03400
]
VM636_08725
DNA replication proteins [BR:
ssel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VM636_08725
Chromosome and associated proteins [BR:
ssel03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VM636_08725
DNA repair and recombination proteins [BR:
ssel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VM636_08725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
WVW67577
LinkDB
All DBs
Position
complement(2036214..2036873)
Genome browser
AA seq
219 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVERPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGSLSGPTPTIAKAA
GKKAAAKKATTAAKKATPTAKKTTAAKKATPAKKTGAAKTTAAAKKSTAKKATAKTTTAT
AKKTAAKKAPAKKATAKKAPAKKSTARKTTAKKTTARKK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagctgggcggacggcagcaggcc
gccgacgccgtcgacgcggtcctggacgccctcgtccgcgcggtggtcgcgggggaccgg
gtgtcggtcaccggtttcggttccttcgagaaggtggagcgtcccgcccgctacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccccgcttccgcgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacatcgcg
gtcaagaaggcccccaagggcagcctgtcgggccccacgccgaccatcgccaaggccgcg
ggaaagaaggccgccgccaagaaggcgaccacggcggcgaagaaggccacccccacggcg
aagaagaccaccgcggcgaagaaggccacccccgccaagaagacgggcgcggccaagacc
acggcggcggcgaagaagagcacggcgaagaaggccacggcgaagaccaccaccgccacg
gcgaagaagaccgccgccaagaaggctcccgcgaagaaggcgaccgccaagaaggccccc
gccaagaagtcgaccgcccgcaagaccaccgccaagaagaccaccgcccgcaagaagtag
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