Streptomyces sediminicola: VM636_15475
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Entry
VM636_15475 CDS
T11831
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ssel Streptomyces sediminicola
Pathway
ssel00260
Glycine, serine and threonine metabolism
ssel00270
Cysteine and methionine metabolism
ssel00450
Selenocompound metabolism
ssel00670
One carbon pool by folate
ssel01100
Metabolic pathways
ssel01110
Biosynthesis of secondary metabolites
ssel01230
Biosynthesis of amino acids
Module
ssel_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ssel00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VM636_15475
00270 Cysteine and methionine metabolism
VM636_15475
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VM636_15475
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VM636_15475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssel04147
]
VM636_15475
Enzymes [BR:
ssel01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
VM636_15475
Exosome [BR:
ssel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VM636_15475
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Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
DUF4350
Motif
Other DBs
NCBI-ProteinID:
WVW68811
LinkDB
All DBs
Position
complement(3542033..3543202)
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AA seq
389 aa
AA seq
DB search
MSDSRTAGGSSQDGPPGTGDGTRAVRAGLPEPVRHEPTLPGPVFAAHFHLPGDPTGPYTY
GRDENPTWTHLERALVELEAPGRDDVGALVFASGMAAISSVLFSQLSTGDAVVLPSDGYQ
ALPLVRAQLEAFGIEVRTAPTGGDAQLDVLDGAKLLWIETPSNPGLDVCDVRRLVEAAHA
GGALVAVDNTLATPLGQRPLELGADFAVASGTKQLTGHGDVLLGYVVGRDAAPLAAVRHW
RKIVGAIPGPMEAWLAHRSLATLQMRVDRQNATALKVAETLRARPEVTGLRYPGLPDDPS
YRIATRQMRRHGCVVSFTLASRAHADRFLDALRLVEGATSFGGVRSTAERRGRWGGDAVP
EGFVRLSVGGEDPEDLVADLLRALDASVG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcccgcacggccgggggaagttctcaggacggccctccggggaccggcgac
ggcacccgcgcggtgcgcgccggactgcccgagccggtcagacacgagccgaccctgccc
ggccccgtcttcgccgcccatttccacctcccgggcgatcccaccggcccgtacacctac
ggccgcgacgagaaccccacctggacccatctggagcgggccctcgtggagttggaggcg
ccgggacgcgacgacgtcggcgcgctggtgttcgcctcgggcatggccgcgatctcctcg
gtgctgttctcgcagctcagcaccggggacgcggtggtgctcccgtccgacggctaccag
gcgctgcccctggtacgcgcccagttggaggcgttcggcatcgaggtgcgcaccgcgccg
accggcggggacgcccagctcgacgtcctggacggggcgaagctgctgtggatcgagaca
ccgtcgaacccggggctggacgtgtgcgacgtccggcgtctcgtcgaggcggcccacgcg
ggcggcgccctggtggccgtcgacaacaccctcgccactccgctcgggcagcgcccgctg
gagctcggcgccgacttcgccgtggccagcggcaccaagcagctcaccggccacggggac
gtcctcctcgggtacgtcgtcgggcgggacgccgctcccctggccgccgtccggcactgg
cgcaagatcgtcggcgcgatccccggccccatggaggcgtggctcgcacaccgttccctc
gccactctccagatgcgtgtggaccggcagaacgccaccgccctgaaggtcgccgagaca
ctgcgggcccggcccgaggtgacggggctgcggtacccggggctccccgacgacccttcg
taccggatcgccacccggcagatgcggcgccacggctgcgtcgtctccttcaccctggcc
tcccgtgcgcacgccgaccgtttcctcgacgccctgcggctcgtggagggggcgacgagc
ttcggcggggtgcggtcgaccgccgagcggcgcggtcgctggggcggcgacgcggtaccg
gagggcttcgtccggctctcggtcggcggagaggaccccgaggacctggtggccgacctg
ctgcgcgccctggacgcgtcggtgggctga
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