Shewanella sedimentimangrovi: JYB85_00135
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Entry
JYB85_00135 CDS
T07846
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_00135 (rsmB)
Enzymes [BR:
ssem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JYB85_00135 (rsmB)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB85_00135 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
Methyltransf_31
Methyltransf_5
Methyltransf_37
Methyltransf_11
FtsJ
Cons_hypoth95
BMT5-like
MTS
Motif
Other DBs
NCBI-ProteinID:
QSX37309
UniProt:
A0ABX7R1G4
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All DBs
Position
complement(33587..34867)
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AA seq
426 aa
AA seq
DB search
MNLRALAAKAVFEVLERGVSLSVALPEQQKLLSDGKDKALLAELCYGVMRFLPQLDHCVS
QFMSKPLKGKQRIVHQLLLVGVYQLYFTRVPAHAAISETAEACRKLKFEGLVKVVNGVLR
NIQRQIPALAESNDTLKYNYPGWLLKRLKAAYEQWPQIVEASHQRPPMWLRNNRRQQSRD
QYIAKLVDAEINCRPGLSDDAIELEFATDVSRLPGFAEGAVSVQDGAAQWAATLLAPKDG
ELVLDACAAPGGKSCHLLELADIQLLAVDADSKRLERVQQNLDRLALNAKVIHGDAANID
SWWNGEKFDRILLDAPCSATGVIRRHPDIKWLRKDSDIQELAELQKQILDHCWQWLKPGG
TLLYATCSILPDENSKQVAAFLARTPDARLDALPQQADPQAIGWQILPGQDGMDGFFYAR
LKKATL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgagggccctggctgccaaagcggtcttcgaggtgctggagcgcggtgtatct
ttgtcggtcgccctgccggaacagcaaaaattgctcagcgacggtaaagacaaggctctg
ctggcagagttgtgttacggcgtcatgcgttttctgccccaattggaccattgcgtcagc
cagttcatgagcaaaccgctcaagggcaaacagcggatagtccaccagctgttgttggtg
ggggtatatcagctttacttcacccgagttccggcacacgccgccatatccgaaaccgcc
gaggcctgtcgcaaactcaaatttgaaggcttggtcaaggtcgtcaacggtgtgctgcgc
aatatccagcggcagatcccggctctggcggaaagcaacgacactctcaaatacaactat
cccggttggctgctgaaacgcttgaaagccgcctatgaacagtggccgcagatagtggaa
gccagccaccagcggccgcccatgtggctgcgcaacaaccggcgccaacaaagtcgcgac
cagtacatagccaagctggtggacgccgagatcaattgccgtcccggcctcagtgacgat
gccattgagctggaatttgccaccgatgtcagccgtctgcccggctttgccgagggcgct
gtctcggttcaggacggcgccgcccaatgggcagccacactgctggcccccaaggatggt
gaactggtactcgatgcctgtgccgcgcccggcggcaagagctgccacctgctggaactg
gcggatatccaattgctggcggtggatgccgacagcaagcgcctggagcgggtacagcaa
aatctcgatcgcctggcgctcaacgccaaggtcatccacggcgatgccgccaatatcgac
agctggtggaacggcgaaaagtttgaccgcatcttgctggatgccccctgctcggccacc
ggcgttattcgccgccatccggacatcaagtggctcaggaaagactcggatattcaagaa
ctggctgagttacaaaaacaaattctggatcactgctggcagtggctgaaacccggtggc
acactgctgtatgcaacctgttccatattgccggacgaaaacagcaaacaggtcgcggcg
ttcctggcccgcaccccggatgccaggctggacgcactgccacagcaggcagatccccag
gccatcggctggcagattttgccgggacaggatggcatggacgggttcttctatgcccgc
ctgaaaaaagcgactctttag
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