Shewanella sedimentimangrovi: JYB85_00745 Help Entry JYB85_00745       CDS       T07846                                  Name (GenBank) tandem-95 repeat protein Organism ssem  Shewanella sedimentimangrovi SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Big_9 Big_12 Cadherin_5 Cadherin_4 Calx-beta Big_5 Cadherin InlK_D3 Ribophorin_II_2nd Motif Other DBs NCBI-ProteinID:  QSX37421 UniProt:  A0ABX7R2N3 LinkDB All DBs Position 173040..182108 Genome browser AA seq 3022 aa AA seqDB search MTLLASKKKMLGALIPALLANGAFAGVSSSRRTSHSASAEINTTRQVELTPNPFAAFTGA QRTQDLSTAQATLAFLQQQGLLEVQHSLDSSVSGDQGLRKEFAASCLVNGNNCVTWYNQT TCTAAVGGQWFPTNNSCAVGGNNPVFTNAASANFAENGTGTVLDINANDGDGGGADSGIS YGKSGTDASVFNLNSSTGVLTFISPPNFESPTDSNTDNVYQLTITATDSDGSTNQNITIT VTDVDEIAPTVTSVSVPANATYIAGQNLNFIINASEAVVVNTGGGTPQLGITIGATLRQA TYLSGSGTSALLFRYTVQSGDLDSDGIAVGTLSANGGTLRDAALNDMNVTLNSVGSTTNV LVDAIVPTVSSVTVPANGTYVAGQNLDFTVNTSENVTVNTGGGTPQMAITIGATTRQAVY QSGSGTSALVFRYTVQSGDADSDGIAVGALSANGGTLKDSVGNDMNLTLNSVGSTTSVLV DALAPTVSSVSVPANGTYIAGQNLDFTLNTSEAVTVNTSGGTPQIAITIGATTRQAVYVS GSGTSALLFRYTVQSGELDTDGIAVGALSANGGTLRDAAANDLNTTLNSVGATTSVLVDA VAPTVSSVSVPANATYIAGQNLNFIINASEAVTVNTGGGTPQLGITIGATLRQATYLSGS GTSALVFRYTVQSGDLDSDGIAVGTLSANGGTLRDAALNDMNVTLNSVGSTTNVLVDAIV PTVSSVTVPSNGTYVAGQNLDFTVNTSENVTVNTGGGTPQMAITIGATTRQAVYQSGSGT SALVFRYTVQSGDADSDGIAVGTLAANGGTLKDSVGNDMNLTLNSVGSTTSVLVDALAPT VSSVSVPANGTYIAGQNLDFTLNTSEAVTVNTGGGTPQIAITIGATTRQAVYVSGSGTSA LLFRYTVQSGELDTDGIAVGALSANGGTLRDAAANDLNTTLNSVASTTSVLVDAVAPTVS SVSVPANATYIAGQNLDFTVNMDDNVTVNTGGGTPQIAITIGTTTRQATYLAGSGSSALV FRYTVQSGDLDTDGITVGSLSANGGTLRDAATNDLNTTLNSVGSTASVLVDAVAPTVSSV SVPANGTYIAGQNLDFTVNTSENVTVNTGGGTPQMAITIGATTRQAVYVSGSGTSALLFR YTVQSGDEDINGIAVGALAANGGTLKDSVGNDMNLTLNSVGSTTSVLVDAVVPTVAISST SSGTVNGQFDVTFTLSESSSDFTAADITVGNGSKGSFSGSGTSYTLAVTPSGDGAVTVDV AGGVFSDAAGNGNTAATQFSINADITPPSIAISSTASGTVNGQFDVTFTLSESSTDFDAA DITVGNGTKGALSGSGSSYSLTVTPSADGQVTVDVAGGVFTDAAGNSNTAATQFSIAADV TGPSVVIGSSSSGTVNGPFDVTFTLSESSTDFTVDDITVGNGTKGALSGSGSSYTLTVTP SADGAVTVDVAGGTFTDAAGNGNNAATQFSIAADVTAPSVAISSTASGTVNGQFDVTFTL SESSSDFTVDDITVGNGSKGSFSGSGTSYTLVVTPSADGSVTVDVAGGVFTDAAGNGNTA ATQFSINADVSAPTLSSSSPFDDEVNVATTVTPVLNFSETVQLGSGSISLQEAGGSSFES FDAGTGMGDNGGSVAVLGSALTITPGAALRTGKHYAIHIDSGAITDSNGNAYAGINDDTT LNFLVRPKLVLSVDKTEISEPHSETATVTLSLQDDGGNAFVALSDVDVILALSGTATLNS DYGLLGSNFTEGTLTLTVPAGSDSSTLSVTAIDDVVSDDGETIAVDIDSVSSGNATEVTA QSVSITVNENRTPTLTGMPASFTIVEDEVSNIDLSAVVLADADNDLLNLVLSVDSGTLTS PLGNSGNVTVVGSGTDAMVLTGLAADLNTFLDNANAVAITTAQDQTVNIVLSAAPSDGLA NGSMSQATVSVTPVNDAPTGSVTISGMAVEDAMLTASNTLADVEGLGTISYQWNRNGVPV LGATAASYLLGDVDVGGLMTVTASYTDGQGTSESVTSAATAAVTNINDAPTGTVSISGVA LEGETLTASHNLADDDGLGAVSFQWLRENAVIANASGSSYLLVAADIGSRISVRAGYTDG HGTAEAVDSAQTEAVVAANKAPVANNSQVSVDEDSSIAIELDATDPDQDTLTVTLVTEPV NGELLQQGSLWLYTPNADFNGDDSFSYSVSDGSLSSGTATVSIMVTPVNDAPVAVADAFE LGSDSGQFSAFNLLANDTDIDGDALTLYQVSTNLGEAKVVDNQLSYRAPLGYQGSVVVNY TVRDAAKAESSAVATLTVSSTAAGIVLTPPADVTVNASGLFTKVEMGTAVATAGGESLPV TVDSSGFFRPGAHKVTWSAADADTTVSVTQAVNVVPQVSLSKDQTATEGSDVSFRVILNG NAVSYPVEVPYSIGGTAATNGADHDLVDGSVMFNQGELEKTVSLHLVDDGSTEGTETLVV TLGAPTHAVLGPKASHTLTIVESNVAPSVVLSATQGDSQTRIVSQDGGLVTVTATVTDPN TSDSHIFDWSQSDNALVDSDSDDTTFSFDPSALSPGFYKLRVAVSDGDKTGMDRLKLRVE AALPTLDTGDSDGDGINDNDEGAGDKDGDGIPDYLDAVNLARNVVQETPGSSNSFLMETE PGLALSLGDVAFRANGSDTGVSNSDVGTHGHGGAGASDDTGFSYSNGMFDFNVEELPLSG QSVNIVVAQFAPVPANAVYRKLMPGGWQDFVVNANNAVASASGAEGYCPPPGDAAYSTGL TEGHWCVQLTIEDGGPNDADGEVNSAIDDPGGLAVPAGSNNAPMTTADVVTMKRNASIDI DVLANDTDVDGDSLMLTSVNADLGQVSIVDNQLHYVAEAGHLGEANLSYGVSDGQGGSAS GKVTVSVLPNQAPVAAPDTASVHSGNSVVIEVLANDSDPDADALTVTAASALHGTVVINA GNSLTYTPTVGYDGTDTLSYSISDGDGGEAQGTVTITVSAMETVTITNRSSGGALHFWTL GALLLGLWRRQSKNNKQGVNAK NT seq 9069 nt NT seq  +upstreamnt  +downstreamnt atgacattgttggcatcaaagaaaaagatgctgggtgccttgattccggcattgttggcc aacggtgcctttgccggtgtcagctccagccgcagaacaagccattctgccagcgccgaa atcaacaccacgcgacaagtggagttaacacctaacccatttgcggcctttaccggagct cagcgtacccaagacctatcgacggcccaagccaccctggcgtttttgcaacaacaaggc ctgcttgaggttcagcacagtcttgattccagtgtgagtggtgatcaagggcttagaaaa gagtttgctgcgtcctgtttggtcaatggcaacaactgtgttacctggtataaccaaaca acctgtaccgctgcggttggcggacaatggttcccaaccaacaacagctgtgccgtcggc ggcaacaatcctgtgtttaccaatgccgctagcgcaaactttgccgaaaatggcaccggg acagttttggatatcaatgcaaacgacggtgatggtggaggcgccgattccggtatttcc tacggcaagagcgggacggatgccagtgtttttaacctgaattccagcacgggggtgctg acttttatttcgccgccgaattttgaaagccccacggatagcaatacggacaatgtgtat caattgaccatcactgcgacggacagtgatggttcaaccaatcagaacatcacaattacg gtcacagatgtggatgaaatcgccccaaccgtgacctcggtaagtgtaccggccaacgcc acttatattgccggacagaatctgaacttcattattaacgccagtgaggctgtggtcgtg aataccggaggtggcacaccacaactgggcatcaccataggtgccaccttgcgtcaggct acttacctgtcgggcagtggcaccagtgccttgctattcagatacactgtgcaatcgggc gatttggacagtgatggcattgccgttggcaccttatcagccaatggtggcactctgcgt gatgccgccctcaacgatatgaatgtcaccttaaactccgtggggtcaaccaccaacgtc ctggtggatgcgatagtgcctacagtctcttcggtgactgttccggccaacggcacctat gtcgccggacaaaacctggatttcacagtgaataccagtgaaaacgtcacagtgaacaca ggcggtggcacgccacaaatggccatcaccataggcgcaaccacccgccaggcagtttac cagtcgggcagcggcaccagtgcactggtgttccgttacacagtacagtcaggcgacgcc gacagcgatggtattgcggtaggggcactgtccgccaacggcggcaccttgaaagattcc gttggcaacgatatgaacctgacgctgaattctgtgggttcaaccaccagtgtgctggtg gatgcgttagcaccgacagtgtcctcggtcagtgtaccggccaacggcacctatattgcc gggcagaacctggatttcaccctgaataccagcgaggctgtcacggtgaacaccagcggt ggcacgccacaaattgccatcaccataggcgctacgacgcgtcaggccgtctatgtctcg ggcagtggtaccagcgcgctgctattcagatatacagtgcaatcgggcgaactggatacc gacggcatagctgtcggggcgctttccgccaatggcggcaccttgcgggatgccgcagcc aatgatctcaacaccaccctcaattcggtgggggcaaccaccagtgtgctggtggatgcg gttgcaccgacagtgtcctcggtcagcgtgccggccaacgccacttatatcgccggacag aatctgaacttcatcattaacgccagtgaggctgtgaccgttaacaccggaggtggcaca ccacaactgggcatcaccataggcgccaccttgcgtcaggcaacttacctgtcgggcagt ggcaccagtgcgctggttttcagatacacagtacagtcgggcgatttggacagcgatggc attgccgttggcaccttatcagccaacggtggcaccctgcgtgatgccgccctcaacgat atgaatgtcaccttaaactccgtggggtcaaccaccaacgtcctggtggatgcgatagtg cctaccgtttcttcggtgacagtcccatccaacggcacctacgtcgctggacagaacctg gatttcaccgtcaataccagtgaaaacgtcacagtgaacacaggcggtggcacgccacaa atggccatcaccataggtgcaaccacccggcaggcagtttaccagtcgggcagcggtacc agtgccctggtgttccgttacacagtacagtcaggcgacgccgacagcgacggtattgcg gtaggcactcttgcagccaacggtggcaccttgaaagactccgttggcaacgatatgaac ctgacgctgaattcagtgggttcaaccaccagtgtgctggtggatgcgttagcaccgacg gtgtcctcggtcagtgtaccggccaacggcacctatattgccgggcagaacctggatttc accctgaataccagcgaggctgtcacggtgaacaccggcggtggcacgccacaaattgcc atcaccataggcgccacgacgcgtcaggccgtctatgtctcgggcagcggcaccagcgcg ctgctattcagatatacagtgcaatcgggcgaactggataccgatggcatagctgtcggg gcgctttccgccaatggcggcaccttgcgggatgccgcagccaatgatcttaacaccacc ctcaattcggtagcttcaaccaccagtgtgctggtggatgcggttgcaccgacagtgtcc tcggtcagcgtgccggccaacgccacctatatcgccggacagaatctggatttcaccgtc aacatggatgataacgtaacggtgaataccggcggtggcacgccgcaaatagccatcacc ataggcacaacaacacggcaagccacctacctggcgggcagtggctccagtgccttggtt ttcagatacacagtgcaatcgggcgatctggataccgatggcattaccgtaggttcactc tcagccaacggtggcaccctgcgtgatgccgcaaccaacgatctcaacactactcttaat tcggtgggatcaactgccagtgtgctggtggatgcagttgcacctacagtgtcctcggtc agtgtgcctgccaacggcacctatatcgccggacagaacctggatttcaccgtcaatacc agtgaaaacgtcacggtcaacacaggcggcggcacgccacaaatggccatcaccataggt gcaaccacccgccaggccgtctatgtctcgggcagcggcaccagtgccctgttgttcaga tacacagtgcaatccggtgatgaagatatcaatggtattgcggtaggcgctcttgcagcc aacggtggcaccttgaaagactccgttggcaacgatatgaacctgacgctgaattctgtg ggttcaaccaccagtgtgctggtggatgcggttgtcccgaccgttgccatcagctccact tcctcgggaacagtgaacggtcagtttgatgtgaccttcactctgagcgaaagcagcagc gacttcactgctgccgacatcacggtcggcaacggcagtaagggcagcttcagtggcagt ggcaccagttacaccctggctgtgaccccttcaggcgatggcgcggtgacggttgatgtg gctggaggcgtgttcagcgatgcggccggcaacggcaacacggctgcgacccagttcagc atcaatgccgatatcaccccaccaagcattgcaatttccagcaccgcctcgggtacggtc aatggtcagtttgatgtgacctttaccctgagcgaaagcagtacagacttcgatgcggcc gacatcactgtcggcaatggcaccaagggcgccttgagtggcagcggcagcagctacagc ctgactgtgaccccaagcgccgatggccaggtgacggttgatgtggcgggcggagtgttt accgatgcggccggcaacagcaacacggcggcaacccagttcagcatcgccgcagatgtc actgggcccagtgtggttattggttccagttcttccggcacggtcaacggcccgtttgac gtgacctttaccctgagcgagagcagcaccgacttcactgtggatgacatcacggtgggt aacggcaccaagggcgccttaagtggcagtggtagcagctatacactgacggtgacgcct tccgccgatggcgctgtcactgtcgatgtggcaggtggtacctttaccgatgcagccggc aatggcaacaacgccgctacccagttcagtattgcggccgatgtcactgcccccagcgtg gccatttccagtacggcttccggcacggtcaacggtcaatttgatgtgaccttcacctta agtgaaagcagctcagacttcaccgtggatgacatcacggtcggcaacggcagtaagggc agcttcagtggcagtggcaccagttacaccctggtcgtgaccccaagcgctgatggttct gtgacggttgatgtggcaggtggtgtgtttaccgatgcggccggcaacggcaacacggcc gcgacccagttcagcatcaacgccgatgtgtcggcaccgaccttaagtagctcatcgccc ttcgatgacgaggtcaatgtggccactacggtcacgccggtactgaacttcagtgagacg gtacaacttggcagcggcagcatcagcctgcaagaggcgggcggcagcagcttcgagagc tttgatgccggcacaggtatgggcgataacggcggctcggtggcggtgctgggcagtgcc ctgaccatcacccccggtgcggcgctgcggaccggtaagcattacgccatccatattgac agcggcgccatcaccgacagcaacggcaatgcctatgcgggtatcaatgatgacaccaca ctcaacttcctggtacgacccaagctggtgctcagtgtcgacaagacagagatcagtgag ccccacagcgaaaccgcaacagtgaccctgtcgctgcaggacgacggtggcaatgccttt gtcgccctgtcggatgtggacgtgatattggccctgagtggcactgcgacattgaacagc gattacggtctgcttggcagcaacttcaccgagggtaccttgaccctgaccgtacccgca ggttcagacagcagcaccctgagtgtcaccgccattgatgacgtggtgagtgatgacggc gaaaccattgcggtcgacatcgactctgtctccagtggcaatgccaccgaggtgactgcc cagtcggtgagcatcactgtgaatgaaaaccggacgccaaccctgacgggcatgcctgcc agtttcaccatagtggaagatgaggtcagcaatatcgacctgtcggctgtggtactggcc gatgccgataatgacctgctgaacctggtgttgtcggtggacagcggtaccctgacatcg cccctgggcaacagcggtaatgtcacagtagtgggctcgggcacagatgccatggtgctg acagggctggcggcagatctgaataccttcctcgacaacgccaacgcggtggccattacc acagcgcaggatcaaaccgtgaacatcgtcctcagcgccgcaccgagcgatggcttggca aacggcagcatgagtcaggccacggtcagcgtgaccccggtcaatgatgcgccgaccggc agtgtgaccatctcaggaatggccgttgaggatgccatgctcaccgccagcaacacgctc gcagacgtggagggtctgggcaccatcagctaccagtggaaccgcaacggcgtgcctgtc ttgggtgctactgccgccagctatctgctgggtgatgtggacgtgggtggcctgatgact gtgaccgccagctacacagatggtcagggcacgtccgagagtgtgacctcggccgcgacg gcggcggtgaccaacatcaacgatgcgcccaccgggactgtgtccatcagcggggtggcg ctggaaggggaaaccctgaccgccagccacaacctggccgacgatgacggtctgggagcc gtaagcttccagtggttgcgcgagaacgccgtgattgccaacgccagtggcagcagctat ctgctggttgccgccgatattggcagccgcatcagcgttcgcgccggttacaccgacggc catggtaccgccgaagccgtcgactcggcccagaccgaggcggtggtggcggccaacaag gcgccggtggccaataacagccaggtcagtgtcgatgaagacagcagcatagcgatagag ctggatgcgacagatccggaccaggacaccctgacagtgaccctggtgaccgagcctgtc aacggtgagctgctgcagcaagggtcgctgtggctgtacacccccaatgccgactttaac ggcgatgacagcttcagctacagcgtatccgatggctcgttgagctcaggcacagctacg gtcagcatcatggtgaccccggtcaacgacgcgccggtggcggtggcggatgcctttgag ctcggcagtgattcggggcagttcagcgccttcaacttgctggccaacgacaccgacatc gatggcgatgccctgaccctgtatcaggtcagcaccaacctgggcgaggccaaggtggtg gataaccagctcagctaccgtgcgcccctgggctatcagggctctgtggtggtcaactac acagtgcgggatgcggccaaggccgaaagcagtgcggtggcgaccctgactgtcagctcc acggcagcggggatagtgctgacaccaccggcggatgtgaccgtcaatgcctccggcttg tttaccaaggttgagatgggcacagcggtggccacggccggtggtgagagcctgccggta acggtggacagcagtggcttcttccggcccggcgcccacaaggtgacctggtctgccgcc gacgctgacactactgtgtctgtgacccaggcggtgaacgtagtgcctcaggtgagcctg agcaaagaccagaccgccaccgaaggcagtgacgtgagcttccgggtgattttgaacggt aatgcggtgagctatccggtggaagtgccctacagcattggcggcacggcagccaccaat ggggcagatcacgatttggtggatggcagcgtgatgttcaaccagggtgaactggagaaa accgtgtcgctgcacctggtggacgatggcagcaccgaaggcacagagaccctggtggtg accctgggcgccccgacccatgcggtgctcggacccaaggccagtcataccctgacgata gtggagagcaacgtggcgcccagtgtggtactgagtgccacccagggcgatagtcagacc cgcattgtcagtcaggacggtggcttggtgactgtgacagccactgtcaccgaccccaac acgagtgacagccacatctttgactggtcgcagagtgataacgcgctggtcgacagcgac agtgacgataccaccttcagctttgacccatcggcgctgtcacctggcttctacaagttg cgggtggcggtgagtgacggcgacaagacaggcatggaccggctgaagctgcgggtcgag gcggcgctgccgacactggataccggcgacagcgacggtgacggcatcaacgataacgat gaaggcgcgggtgacaaggatggtgacggtatcccggattacctggatgcggtcaacctg gcccgcaacgtggtgcaggagactccgggcagcagcaacagcttcctgatggaaaccgaa cccggtctggcattgagcctgggggatgtggcgttccgcgccaacggcagtgacacaggt gtcagcaacagcgatgtggggacccatggccatgggggcgcaggtgcatcggacgacacc ggcttcagctacagcaacggtatgttcgacttcaacgtagaggaactgccgctgtcgggt caatcggtcaacatagtggtggcccagtttgcgccggtgccggccaatgctgtgtaccgt aagctgatgccgggtggttggcaggacttcgtggttaatgccaacaacgccgtggcctcg gcatccggtgccgagggttactgcccaccaccgggtgatgcggcttacagcacaggtctg accgaaggccactggtgcgtgcagttgaccattgaggacggtggtccgaacgatgccgac ggcgaagtgaacagcgccatcgacgatccgggtggtctggcggtgccggccggcagcaac aatgcgccaatgacgaccgccgatgtggtgaccatgaagcgcaacgccagtatcgacatt gatgtgctggccaatgacaccgacgttgacggcgacagcctgatgttgaccagcgtgaat gccgacctgggtcaggtgagcatagtggacaaccaactgcactatgtggccgaagccggc cacctgggtgaggcgaacctgagctacggtgtcagtgacggccagggtggctcggccagc ggcaaggtgaccgtgtctgtgttgccgaaccaggcgccggtggcggctcctgatacggcc tcggtgcatagtggcaacagcgtggttatcgaggtgctggccaacgacagcgacccggat gcggatgcgctgacggtgactgcggccagtgcgctccatggcaccgtggtgatcaacgcc ggcaacagcctgacttatacgccgacagtgggttatgacggcacggatacgctgagctac agcatcagcgacggtgacggcggcgaagcgcaaggcactgtgaccataacggtatcggcg atggagacggtgaccattaccaaccgttcctccggcggtgcgttgcacttctggacgctg ggcgcgctgctgctgggcctctggcgccgtcagtcgaaaaacaataaacagggagtcaat gccaaatga

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