Shewanella sedimentimangrovi: JYB85_01245
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Entry
JYB85_01245 CDS
T07846
Name
(GenBank) heme lyase CcmF/NrfE family subunit
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_01245
Transporters [BR:
ssem02000
]
Other transporters
Others
JYB85_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
DUF2651
Motif
Other DBs
NCBI-ProteinID:
QSX37507
LinkDB
All DBs
Position
267299..269266
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AA seq
655 aa
AA seq
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MIPELGHFSLITGMAFALLLTIVPLIGVARKDQYLVRYAWPLAYGMCFFILLAIVALGYS
FAVDDFSVSYVAQHSNSQLPIFFKIAAVWGGHEGSLLFWVFAISVWAAAVATFSKGLEEV
FTARVLAVIGLITLGFSTFTLLTSSPFARLFPAPMEGRDLNPMLQDVGLIFHPPMLYLGY
VGFAVSFAFAIAALLSGRLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLIGTALVHSLIVTEKRGTFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS
VHSFASDPSRGMFILLLLGITIGGSLTLFAFRASDMTSPAKFELMSKETMLLLCNVILTV
AAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPLVLVLFVFMGIGPIVRWKKAKQGE
LKRQLLIPAVVSVLFGLAAPFLAGGEFNAWVAAGIAAAVWITLATLREAYNLAKTKEGTF
ELTRISRGQLGMIVAHLGIAVSVVGATMVSNYTIEKSVRMGPGASYELAGYTFKFVDIKN
MAGPNYTAKQGQIEVYEGDKFLTLLKPDRRQYNVSTMDMTEAGIDWGLFRDLYVTMGDPV
SDTEFAVRLNYKPFVRWLWFGGIFMMIGGLFAASDKRYRVRAAAPEAAQGKMATA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagaacttggacatttttcgctgatcaccggcatggcctttgccctgctgctg
accatcgtgcctctgattggggtggcgcgcaaggatcagtacctggtgcgttatgcttgg
cctttagcttacggcatgtgtttctttatccttttggccatagtggctctgggatacagc
tttgccgtggacgatttctcggtttcctatgtggcccagcattccaactcgcagctaccc
atattcttcaagattgccgcggtctggggtggtcatgaaggttccctgctgttttgggtt
ttcgccatctctgtttgggccgctgcagtagcgaccttcagtaagggattggaagaggtg
ttcaccgcaagggtgttggccgttatcggtcttatcaccctgggcttcagtaccttcact
ttgctgacctccagtccctttgcccgcctgtttccggcaccgatggaaggacgggatctt
aaccccatgctgcaggacgtgggccttatcttccatccccccatgctgtatctggggtat
gttggatttgcggtcagttttgcttttgccattgcggcgctgctcagtggtcgcctggat
tccgcctgggcacgatggagtcgtccttggacactcgctgcctggatattcctgaccggc
ggtatcgcgctgggctcctggtgggcctactatgagctgggctggggcggctggtggttc
tgggatccggttgaaaacgcctcctttatgccttggttgatcggtaccgctttggtgcat
tcgcttatcgtcaccgaaaagcgcggcaccttccgcaactggacggtactgctgtctatt
tttgcgttttctctaagcctgcttggcacctttattgtgcgttccggcgtgctgacctcg
gtgcactcctttgcgtccgaccccagtcgcggtatgttcattctgttgctcttgggtatt
accataggtggttcgctgacactctttgccttccgggccagcgatatgaccagtcctgcc
aaatttgaactcatgtccaaggaaaccatgttgctgttgtgcaatgtgatactcactgta
gccgcaggcactgtgctgcttggcaccctgtatccactgctgattgatgcactgggcatg
ggtaagatctccgttggaccaccgtactttaatgccgtgtttgttcctctggtgctggta
ctgttcgtcttcatggggatcggtcccattgtgcgatggaaaaaagccaaacaaggtgaa
cttaagcgtcagttattgataccggcggttgtgtctgtactgtttggtttggcggctcca
ttcctggccggcggagagttcaatgcctgggttgctgccggaatagcggcagctgtgtgg
attaccctggcaaccctgcgtgaagcttataacctcgccaagaccaaagaaggcacattt
gaactgacccgcatcagccgcggccaattgggcatgatagtcgcgcacctgggcatcgcc
gtttctgtggttggagcaaccatggtgtccaactacaccatagaaaagagtgtgcgtatg
gggccgggtgccagctatgagttggccggttacaccttcaagtttgtcgatattaagaat
atggccggtccgaactacacggcgaaacaaggccaaattgaggtttacgaaggggataag
ttcctgacgctgctcaagcccgacagacgtcagtacaatgtcagcaccatggatatgacc
gaagccggcatcgactggggtctgttccgggatttgtatgtcaccatgggtgatcctgtc
agtgatacagaatttgccgtgcgtctgaattacaagcctttcgtccgctggttgtggttc
ggtggcatatttatgatgatcggcggtttatttgccgcttcggacaagcgttatcgggtg
cgtgccgcagcgcctgaggcggctcagggaaaaatggcaactgcctga
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