Shewanella sedimentimangrovi: JYB85_01765
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Entry
JYB85_01765 CDS
T07846
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00300
Lysine biosynthesis
ssem00550
Peptidoglycan biosynthesis
ssem01100
Metabolic pathways
ssem01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYB85_01765 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYB85_01765 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYB85_01765 (murF)
Enzymes [BR:
ssem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
JYB85_01765 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QSX37600
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Position
428437..429804
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AA seq
455 aa
AA seq
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MISLSLQELAVATDGRLLGENIQIDAVGSDSRAMKPGSLFVALVGERFDGHDFAVNAVTA
GASALLVERELPLAVPQLLVESGLKALGQIGALVRDKVNPVCVALTGSNGKTTVKEMIAT
VLSQKYQVLFTAGNFNNDIGVPLTLLRLSEGDEYGVFELGANHKGEIDYTSGLVRPRVAL
VNNVGSAHLEGFGSIEGVAAAKSEIYGHLADDGVAVINADDAFADYMTQAAAGHKMIRFG
IHNQADVTATGLEADAFGCYGFQLHWQEQTIAIKLPLAGAHQVNNALACASVCLALGLSL
VEIASGLAALKPVKGRMLPHRLGRLTLVDDSYNANPSSVKAAIDWLREINGNRCLVLGDL
GELGDNAALLHAEVGGLARDSGIEALFCQGRLSEHCSRAFGSEHFVDLDVLVNKLIKHIN
QLHGDVTVLVKGSRSAAMERVVEALIAAHGRGELK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgatctccctgagtttacaggaactggcagtcgccaccgatgggcgcctgctgggtgaa
aatattcaaatcgatgctgttggcagcgacagccgtgccatgaagcccggcagcctgttt
gtggccctggtgggcgagcgcttcgatggccatgattttgctgtcaatgccgtgactgca
ggtgcctcggcgctgttggttgagcgtgagttgccgctcgctgtgccgcagctgttggtg
gaaagtggcctcaaggccctggggcaaattggtgccctggtgcgcgacaaggtcaatccc
gtgtgcgtggctctcaccggctccaatggcaaaaccacggtcaaggaaatgatagcgacc
gtactgtcgcaaaagtatcaggtgctgtttaccgccggcaacttcaacaacgacataggt
gtacccctgactttgctgcgactgagcgaaggcgacgagtacggggtgtttgagctgggc
gccaaccataagggcgagattgattacacctctggtctggtcaggcccagggtagccctg
gtcaataacgttggcagtgcccacctggaaggttttggctctattgaaggggtggccgcg
gccaagtcggagatttatggccatctggccgacgatggtgtggcggtgatcaatgccgac
gatgcctttgccgactatatgacccaggccgctgcgggccacaagatgattcgtttcggc
attcacaaccaagcggatgtgacggcaaccgggcttgaggccgatgccttcggatgttac
ggctttcagctgcactggcaggaacaaacgatagccatcaagttaccgctggccggtgcc
catcaggttaacaacgctttggcctgtgccagtgtctgcctggcccttggcctgagcctt
gtggagatagcctccgggctggcggcgcttaagccggtaaagggcagaatgttgccccac
aggctggggcgcctcaccctggtggatgacagctacaacgccaatccttcctcggtgaag
gccgccatcgactggttaagagaaattaacggaaatcgctgtttggtactgggcgatttg
ggcgaattaggcgacaatgctgcccttttgcacgccgaggtgggtggtctggccagagac
agtggcatagaggcgctgttctgtcagggccgtctcagcgagcactgcagccgtgccttc
ggcagcgaacattttgttgacctggatgtcttggttaacaagttgattaaacacatcaac
cagttacatggagatgtgactgtgttggtcaaagggtcccgcagcgccgccatggagcgg
gttgtggaggccttaattgcggcccatggtcgcggggagttaaagtaa
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