Shewanella sedimentimangrovi: JYB85_01775
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Entry
JYB85_01775 CDS
T07846
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00470
D-Amino acid metabolism
ssem00550
Peptidoglycan biosynthesis
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYB85_01775
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYB85_01775
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
JYB85_01775
Enzymes [BR:
ssem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JYB85_01775
Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
Precursor biosynthesis
Amino acid ligase
JYB85_01775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
DAO
TrkA_N
NAD_binding_8
HTH_6
UBA_BIRC2-3
Pro_dh
Motif
Other DBs
NCBI-ProteinID:
QSX37602
UniProt:
A0ABX7R1C9
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All DBs
Position
430891..432222
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AA seq
443 aa
AA seq
DB search
MTMPLAHTYSHIVLGLGATGLSVVRYLARQGIEPLVMDSRREPPGADKLRREFANVPLMS
GGFDCRYLVQAKQIVISPGIAMDTPEVQAALDMGIEVIGDIELFARAIADRPPCVLAITG
SNGKSTVTTLVGEMAKADGKRVAVGGNIGIPVLELLDSDAELFVLELSSFQLETTHSLNC
IAATCLNISEDHMDRYSDLEKYRQAKLHLYDQTRLCIFNRDDQLSIPTEPHNQNSFGLGI
PKVDEWGIADGKIFHGASEIMPLLHVALIGSHNHANLMAAMALADAAGVSRSAMVKVAQE
FTGLAHRCEAVASHEGITWVNDSKATNVGATVAALHGLSGHLGEIILIAGGDGKGADFEP
LREALHGVAQLITLGRDGHKIATLKEGAIEVANMAEAVAKAASLAGSGDIVLLSPACASL
DMYSNFMARGDDFRHQVELLYGN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgccgctcgcccatacctactcgcacatagtccttggcctgggagccacggga
ttgtctgtggtgcgctatttggcgcgtcagggcattgagccgctggtgatggacagccgc
cgtgaaccgcccggggctgacaagttgcgccgggagtttgccaatgtaccgctgatgagc
ggtggctttgactgccgctatctggtgcaggccaagcaaatcgtcatcagtccggggatt
gccatggacacccccgaagtgcaggccgcgctggatatgggcatagaggtcataggcgat
atagagttgttcgcccgcgccatagccgacaggccaccctgcgtgctggccattaccggt
tcaaacggtaagtcgaccgtgactaccctggtgggggaaatggccaaggccgatggcaag
cgggttgcggttggcggcaacataggcattccggtactggagctgctggattcggacgcc
gagcttttcgtgctggaattgtccagtttccaattggaaaccacccacagcctgaattgc
attgctgccacatgtttgaacatcagtgaagatcatatggacagatacagtgatctggag
aagtaccgccaggccaaattgcatctgtatgaccagacccggctgtgcatctttaaccgt
gacgaccagctgtccatccccacagagccccacaaccagaacagttttggcttgggtatt
cccaaggtggatgagtggggcatagccgatggcaagattttccacggcgccagtgagatc
atgccgttgctgcatgtggcgctgatcggcagtcataaccatgccaacctgatggcggcc
atggccctggccgatgccgccggggtttcccgctctgccatggtcaaggtggcacaggaa
tttaccggactggcccatcgctgtgaggcggtcgctagccatgaaggtatcacctgggtc
aatgactccaaggccaccaacgtgggcgccacagtggcggcgctccatggtttgagcggc
cacttgggtgagatcatcctgatagccggtggcgatggcaagggcgcggactttgagccc
ctgcgcgaggcgctgcatggcgtcgctcagttgatcaccctggggcgtgatggtcacaag
atcgcgacgctcaaagaaggcgctatcgaagtggccaatatggccgaggccgtggccaag
gctgccagtctggccggcagcggcgatatagtgttgctgtcgcctgcctgtgccagcctc
gacatgtacagcaattttatggccagaggtgatgatttccgtcatcaggtggagcttctg
tatggcaactga
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