Shewanella sedimentimangrovi: JYB85_02060
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Entry
JYB85_02060 CDS
T07846
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00330
Arginine and proline metabolism
ssem00480
Glutathione metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JYB85_02060
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JYB85_02060
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
JYB85_02060
Enzymes [BR:
ssem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
JYB85_02060
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QSX37645
UniProt:
A0ABX7R376
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Position
492451..493626
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AA seq
391 aa
AA seq
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MSQFQSIDVADYYDKETFARIEEFAKDKATPFVVIDTAIIAKQYDDMVTNFPYASVYYAV
KANPAKEILTLLKDKGSNFDIASIYELDMVMAVGVTADRVSFGNTIKKRKDVKAFYDRGV
RMFASDSEADLRMIAEEAPGSRIYVRILTEGTDTADWPLSRKFGCQNEMAYELLVLAKEL
GLVPYGISFHVGSQQRDIGAWDSAIGKVKHIFDRLRDEHGIVLEMINMGGGFPANYIDKT
NELATYAEQITHFLKEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISRKSYTALERWVF
TDVGKFSGLIETMDEAIKFPIYTERQGELEKCVIAGPTCDSADIMYEQYAYGLPDDLAIG
DRLYWLTAGAYTTTYSAVCFNGFPPLKDYYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcaatctattgatgttgctgattactatgacaaagaaaccttcgcccgc
atcgaagagtttgccaaggacaaagcaacgccttttgtagtgatagatactgccatcatt
gcgaaacaatacgatgacatggtcaccaattttccgtatgccagtgtttattatgcagtt
aaagccaacccggccaaggagatcctgaccctgctcaaggacaagggttccaatttcgac
attgcctccatctatgagctggatatggtgatggccgtgggcgtgaccgcagatcgcgtc
agctttggcaacaccattaagaagcgcaaggacgtcaaggccttctacgaccgcggtgtg
cgtatgtttgcttctgactccgaagccgatctgcgcatgattgccgaagaagccccgggc
tctcgcatctacgtccgaatcctgaccgaaggcactgacaccgccgactggccactgtca
cgcaagttcggttgtcagaacgaaatggcttacgagctgttggtgctggccaaggagctg
ggactggtgccctatggcatctctttccatgtgggttcacaacagcgtgatattggtgcc
tgggattcagctattggtaaggtaaagcacattttcgatcgtctgcgcgatgagcacggt
atagtgctggagatgatcaatatgggtggtggcttccccgctaactatatcgacaagacc
aatgaactggccacctatgccgagcagatcacccacttcctcaaggaagactttggtgac
gacctgccacagatcattcttgagccaggccgttcactgatctccaatgccggggtactg
gtatccgaagtggtgttgatcagccgcaagtcctacacagcgctggagcgttgggtgttt
accgatgtgggtaagttctccggtcttatcgaaaccatggatgaggccatcaagttcccc
atctataccgagcgccagggcgagttggaaaagtgcgtgattgccggtccaacctgcgac
agtgccgacataatgtatgagcagtatgcctatggtttgccagacgatctggccattgga
gacaggctctactggttgactgccggtgcctacaccaccacctattcggccgtgtgcttc
aacggtttcccaccgctgaaggattactatctgtaa
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