Shewanella sedimentimangrovi: JYB85_02240
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Entry
JYB85_02240 CDS
T07846
Name
(GenBank) response regulator
Organism
ssem
Shewanella sedimentimangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Response_reg
HK_sensor_dom_bact
Hpt
PAS
PAS_4
dCache_1
PAS_8
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QSX37681
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All DBs
Position
540939..544394
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AA seq
1151 aa
AA seq
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MAWAPGAAVKAFRRFGILPMGALLLVAVCIAGVSYQEQRLESQAELELQQSMSRSVAFLT
TKLSTLYDQQQKNLRFLHATPPIAGLARAELHGGVDPLDGTHFSQWQRRLETIFSAMLLN
NPEIDQLRVIRGDSGGKEIVRVDRLSGDIRVITAQQLQSKAQAYYFTAAMALAPGQMYIS
SLDLNREYGQIEFPYRPTTRFALPIFTAEGQKYGFIILNLNTGSLLAQMRQATGPGEELI
LADNQGNFIVHPKPEFQFSRDLDSGHSWQADYRVKQVNGYFGLMQEQSDSAEAFFLRRTV
RYGGQPDEQFQLLLTRSKNQLDSMLLDKRIDSYGFVLTILLVASLLLVLLNRNYRNSHKL
AETRAEQEAIISGSADAIIGLDLFNRVTSWNRAAEQLFGYSAQTAMGSDIDSLGLFRDFG
FSELMARAHAGGSLTATISSNEGDRELQLELTLSPIQLQGQKVCGTALIARDVTAQYEAQ
SKIRMINQDLESQVASRTEELADAHKKALQASEIKSAFVSNVSHEMRTPLNGIMGTLNLI
KREPLSPSQMKYVDMAESSAAALSSLINDILDLSKIEAGKLEFDSQPFNPVRVMETLVCS
AAIRAMEKDLEIILDISELDYVCLMGDASRLKQVLNNLLSNAIKFTHKGEILIRARTQVS
ADNQIRLDVDVFDTGIGIAEENQQKLFQAFSQEHGSISSEYGGTGLGLSISRQLCQLMKG
NIGFESEKDRGSHFYFHVYFGQEGAKKEQHQQPLAGVNAAVLSPNPRSKEVLERMLARYG
ATVMQLNEQRTLPAGELVLLVDNLYPVGSGTAQWLSREAELKILRFGSAIKEWPCKVDHE
LGKPVNRAELLAAITGQVQEVNVSQPQLGNHFPVAALEGAGILVVDDNHINQEVVKGFLA
PQQAELWFASTGKQALDIMVRLSQQGTRLNCVLMDCQMPEMDGYVCTKLIRLGEGGEAFR
QVPIIAMTANAMSGEREKCLAAGMSDYITKPISYDQLLSHVLQWVTSGAGTPAIAAPQLP
SNTLPVWDRKAALARMLDNHTLVDKITRMYVDTVPEKIDHLRLVVETMELNAIRELAHKL
KGLSGDIGASQLHRLLAELEQASKQGSREDINGLFSRICQGFEELFPMLEQHLAGEKSQS
QTTGRSIKSLQ
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggctccgggagcagcggttaaggcgttcaggcgttttgggatcttgcccatg
ggggccctgttgctggtggccgtgtgtattgccggtgtcagttaccaggagcaacggctt
gagtcccaggctgaactggaattgcagcaatccatgtcccgcagtgtcgcctttctgacg
accaaattatcgacgctttatgaccagcagcagaagaacctgcgttttttgcatgcgact
ccacccatcgccggcctggcccgggccgaactccatggcggtgtggaccctttggatggc
actcatttttcccaatggcaacggcggctggagacgattttcagtgccatgctgctcaac
aatccggaaatagatcagttacgggttatccggggggattccgggggcaaggagatagtc
cgggtcgacaggttatccggcgatatcagggtgattacagcacagcagctgcaatccaag
gcccaggcctattacttcacggcagcaatggccttggctcctggccaaatgtacatctct
tcactggatcttaatcgggaatatggtcagattgagtttccctatcggccgaccacccgt
tttgccctgcccatctttaccgcagaggggcaaaaatacggtttcattatcttgaatctc
aataccggcagcctgctggcacagatgcgtcaggctacagggccgggggaagaactgata
ttggccgacaaccagggaaactttattgtccatcccaaacccgaattccaattcagccgt
gacctggactcgggccacagctggcaagcggactacagggtgaaacaggttaacggctat
ttcggtctgatgcaggagcaaagcgacagcgctgaagcctttttcctcaggcgcactgtg
cgttatggcggtcagcccgacgagcagttccagttgctgctgacccgctcaaagaaccag
ttggactccatgttgctggacaagcggatagacagctatggtttcgtgctgaccatattg
ctggtggcttcgctgttgttggtgttgctgaaccgaaattaccgcaacagccacaaattg
gcggaaacccgggccgagcaggaagccatcatcagtggttcggcggatgccattatcggt
ctggacttgtttaaccgggtcaccagttggaaccgcgcagccgagcaattgtttggctac
agtgcccaaaccgcaatgggcagcgatattgactctttggggctgtttcgggattttggt
ttttccgagctgatggcgcgggcccacgctgggggcagtctgaccgccaccatcagctcc
aatgaaggcgacagggagctacaactggagttgaccctgtctcccattcaattgcaggga
caaaaggtctgcgggactgcgctgatagcacgtgatgtgacggcgcaatatgaggcccaa
tcgaagatccggatgataaaccaggatctcgagagtcaggtcgcaagccgcaccgaggag
ttggccgacgcgcacaagaaggcattgcaggccagcgagatcaaaagtgcctttgtttcc
aacgtcagtcatgagatgcgtacaccgctcaatggcatcatgggcaccttgaacctgatt
aagcgtgagcccctgagtccgtcacagatgaagtatgtcgatatggcggagtccagcgcg
gcggccctgtcgagcctgattaacgacattctcgacctgtccaagattgaagccggcaaa
ctggagtttgacagccaaccctttaacccggtgcgggtgatggaaaccctggtgtgctcc
gctgctatccgggccatggaaaaggatctggaaatcattctcgacatcagcgagttggat
tatgtgtgcctgatgggggatgccagccgtcttaaacaagtactcaataatctgctcagc
aatgccatcaagtttacccataaaggcgaaatactgatccgtgcccgaacccaggtcagt
gcggataaccagatacgcctggatgtggatgtctttgataccggcattggcatagccgaa
gaaaaccaacagaagctgttccaggccttcagtcaggagcatggcagcatatccagtgaa
tatggcggtactgggttggggttgtccatcagtcgccaattgtgccagttgatgaagggc
aatataggttttgaatcggaaaaagacaggggcagtcatttttacttccatgtttacttc
ggccaggaaggcgccaagaaggagcaacatcaacagcccctcgccggggtcaatgcggcg
gtactgagccccaaccccagatccaaggaggtcttggagcgcatgttggcccgctatggc
gccacggtgatgcaactcaacgagcaaaggacgctgccagcgggggagttggtgctgctg
gtggacaatctctaccctgtgggcagtggcaccgcccagtggctgagccgagaggcggag
ctgaaaattctccgttttggatccgcaatcaaggagtggccctgtaaggtggaccatgaa
cttggcaagccggtaaaccgggccgagttgctggcggccattaccggacaggtgcaggag
gtcaatgtcagtcagccccagcttggcaaccatttccctgtggccgccctggagggggcc
ggcatcctggtggtcgacgataaccatatcaatcaggaagtggtgaaaggctttttggcg
ccgcaacaggcggagctgtggtttgcctccaccggcaagcaggcgctggacattatggtg
cgcctcagccagcaggggacccggcttaactgcgtgctgatggattgtcagatgccggag
atggacggttatgtgtgcaccaaactgatccgattgggggagggcggagaggcattccgg
caggtgccaatcatagccatgacggccaacgccatgtcgggagaacgtgaaaaatgcctg
gcggcggggatgtccgactacattaccaagcccatatcctacgatcagttgctgagccat
gtactgcaatgggtcacgtccggcgccggaaccccagccatcgccgctccccaattgccg
tcaaataccttgccagtgtgggacagaaaggctgccctggcgcgcatgttggacaaccac
acgctggtggacaagatcacccgtatgtatgtcgacactgtgcctgagaaaatcgaccac
ctcaggttggtggtagaaaccatggaactcaatgccatcagggagttagcccacaagctc
aagggcctgtccggcgatataggcgccagtcagttgcaccggttgctggccgagttggaa
caggccagcaagcagggtagccgcgaagatatcaatgggttgtttagccgaatttgccag
ggttttgaagagctgttccccatgttggagcagcatctggccggagagaaaagccagagc
cagacaacagggcggtcgattaagtcattgcaataa
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