Shewanella sedimentimangrovi: JYB85_03040
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Entry
JYB85_03040 CDS
T07846
Name
(GenBank) hypothetical protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00520
Amino sugar and nucleotide sugar metabolism
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JYB85_03040
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
JYB85_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K319L-like_PKD
SprB
PKD
Motif
Other DBs
NCBI-ProteinID:
QSX37834
LinkDB
All DBs
Position
complement(740369..743518)
Genome browser
AA seq
1049 aa
AA seq
DB search
MLVFTLTACGRHHHKEAPVDVSALSIPVTLNTVRGSQEGIPLTWSSVETATSYAVYRCEV
PDGVTQDLVAAAPIDNCGDPIAITTELSFTDLPPLTAPQAYVYHLRACADLEAQVCGSVI
ASIAASQAIPADIPQMTTNIGDDGRQVISGLTTTLHAFAHDAVGPVSWSWTQESGPKVTL
TGADTSVLTFTAPTVTINTLLSFELRTQDDNGIGRPSKVAVTVVPANNVSVKAGATSRLV
QAGHEVFLHARGSDSNLTYEWRQISPDSPVVTLINANTANPSFIAPSIPQGGVLHFDVTV
TDPVTGQNASARTAVRVQYAVPTLTPILEPSQTPDPVPTPIPIAAPLLMPLQIAQPLQVP
QPLQLVPSPSPVLVPPKVPPQALVLLAPPVVTATGGTSVQLGMTASGGQEPYQWDWIQTG
GPAASLLDSTQEVVTVELPSVDSAQALTFQASLIDAEGNERTAEAVVHATLPPGPASGAT
PTPITPLDPRLVVVNETVPVMSTPLTDVTVTQTSGPELQISQQSNGGDTGTQISVTAPLL
KDNSAHATLSVSGKDPKGQPLHYVVPILIMRPLPVIPAPEAPPQVLPPQQVPKQDDPLII
IGGVTGVIVNEGSTRGLAVAVQGGKGRDSYRYLWSYLKDDDGPDITLHHTDTARMIFTAP
GVDRPTLLRFNVQITDGAQTIQRDGLVQVNDVSASLVVGALAPITVDSGQSVSISAPEPT
GGIQFPTRDHYRYAIAQVLGTPTVTLTPTDDQADERASHWTFIAPTLAPGAADAVLQFEL
TSRDRVDNTVKTTQEVIVKAPPLPSVPPLVPNLSVPVSIALGAPITLQADASGGTPPYTF
EWLAHPEVVAIAGRSSFNLPDLTATGQNPTLSPDNLGTRRGDAADYRLKLTLKVTDANLQ
TAETKGEVQVVLMEANRPGTVALLCGKLATNEPCTDLELVLGQTKACPDDKPYAMNQVNQ
INRFLSEYRYCVDAITAVNLFVVGGSKDNPLCRHYDPAASSGSITCYLACYGDDCNIDTN
PPDSTLVGPVGRDGLLSIGLPPLTSGSGH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttggtctttacactgacggcctgtggcagacaccaccataaagaagcgcctgttgat
gtttcagcactttccatacctgtcacgttaaatactgtgcgggggtcccaggaaggtatt
ccccttacctggtcgagtgttgagacagcaaccagttacgccgtttaccgttgcgaggtt
cccgatggcgtcacccaggatttggttgccgcggcaccgattgataattgcggcgatccc
attgcgatcaccactgaactcagtttcaccgacctgccaccgctgactgcaccacaggcc
tacgtctatcacctgcgcgcctgcgctgatcttgaggcacaagtgtgtggcagcgtaata
gcatccatcgccgcgtctcaagccattcctgcagacatcccgcaaatgaccaccaatata
ggcgatgatggccgtcaggtgatttcgggactgacaaccacgttacatgcctttgcccac
gatgctgtagggccggtttcatggagctggacccaggagagtggcccaaaagtcacgctg
acaggcgccgacacttcggtattaacctttaccgcgccgacggtcacgataaacaccctg
ctgtcattcgaactgcgaacccaggacgataatggtataggccgcccctccaaggtggca
gtcacagtggtaccggcaaataacgtcagtgtcaaagccggggcaacatcgcgtttggtc
caggcaggacatgaagtcttcttgcacgccagaggcagtgatagcaatctgacttatgaa
tggcgacaaatatcccccgactcaccggtcgtcaccctgattaatgcaaacacggccaat
cccagttttattgccccttccattccccaagggggcgtattgcatttcgacgtcactgtt
acagatcctgtgaccgggcaaaatgccagtgcacgtacagcggtccgggtgcaatatgct
gtgccaaccttaaccccgatactggaaccgtctcaaacgccggatcctgtgcccacgccg
atacctattgcagcccccttactgatgccactgcaaatagcacaacccttgcaggtcccc
caaccgcttcaattggtgccgtcacccagtccggtgttggtgccccccaaagtaccgcca
caggccttggtcttattggcaccacccgtggtaaccgccacgggcggaaccagcgttcaa
ttaggcatgaccgccagtggtggtcaagagccctatcagtgggattggattcagaccgga
ggtcctgcggcatcgctcctggacagcacccaagaagtggtgacagtcgagcttcccagt
gtggattccgcgcaggcactgactttccaggccagccttattgatgccgaggggaatgag
cgtaccgctgaagccgtggtgcacgccaccctacccccagggccggcgagtggtgcaaca
ccaacgccaatcaccccactggacccccgtctggtggtggtgaacgaaacagtccccgtg
atgagtacaccattaacggatgtgacagtgacccagacctcggggcccgaactgcaaata
tcacagcagtcaaacggcggtgatactggtacccagataagcgtcacggccccgctcctc
aaggacaactcggcccacgccaccctgagcgtgagcggtaaagatcccaagggacagcct
ttgcattatgtggtgccaatactcattatgcgcccgctgccggtgatcccggcaccggaa
gcaccaccacaggtattaccgccacaacaggtgccaaaacaggacgaccctttgattatc
attggtggtgtaactggggtgatagtcaatgaaggctccacaaggggcttggcggttgcg
gttcaaggcggtaaaggtcgtgattcttatcgttatctttggtcttatctgaaggatgat
gacggcccggatatcacccttcaccacaccgacaccgccagaatgatatttaccgcgccc
ggagtcgacaggccaaccctgctgcgattcaacgtgcaaatcaccgatggcgcccaaacc
atccaacgggatgggttggtgcaggtaaacgatgtctccgcctctctggttgtcggcgca
ctggcacctatcactgtcgacagcggtcagtccgtgagtataagtgcacccgaacccacg
gggggcattcaatttccaaccagggatcattaccgttatgccattgcacaggtgttagga
accccgacagtcacccttaccccaactgacgatcaagccgatgagcgggcaagccattgg
acctttattgcgcccaccctggcacctggcgctgccgacgctgtgctgcaatttgagctg
accagccgagatcgcgtcgataataccgttaaaacaacccaagaagtgatagtcaaggca
cctcccctgcctagcgttcctcccttggtccccaatctgtctgtgcccgtaagcattgcc
ttgggcgcacctatcaccctgcaagcagatgccagtggcggaacgccgccctataccttt
gaatggttagcgcacccggaagtggtggcgattgctggtagatcctcatttaacttaccc
gacctgacggcaaccggacaaaatccgactctgtcaccagataatttgggaacccgacgc
ggagatgcggctgattaccgcctcaagctgaccttaaaagtaacggatgccaatctgcaa
accgcagagactaagggagaggtacaagtcgtgctgatggaagccaatcggccaggcaca
gtggcattgctatgtggcaagctcgccaccaatgagccctgcactgatttggagctggtc
ttggggcaaaccaaagcctgtccagacgataaaccctatgctatgaaccaagtcaaccaa
attaaccgctttctatctgagtatcgatactgtgtggatgccatcacagccgttaatctg
tttgtggtgggcggcagcaaagacaaccctttatgtcgccattacgatccagcagcatcg
tcggggtcaatcacctgttacctggcgtgctacggtgatgattgcaacattgatacaaat
ccaccagacagcactctggttgggccggttggccgcgatggcttactctctatcggactg
ccaccgctgacaagcggttcagggcattaa
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