Shewanella sedimentimangrovi: JYB85_03895
Help
Entry
JYB85_03895 CDS
T07846
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00020
Citrate cycle (TCA cycle)
ssem00620
Pyruvate metabolism
ssem00720
Other carbon fixation pathways
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssem_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB85_03895
00620 Pyruvate metabolism
JYB85_03895
09102 Energy metabolism
00720 Other carbon fixation pathways
JYB85_03895
Enzymes [BR:
ssem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
JYB85_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
QSX37992
LinkDB
All DBs
Position
939537..940910
Genome browser
AA seq
457 aa
AA seq
DB search
METRIERDSMGQVAVPKEALYGAQTQRAVDNFPISGTPMPKAFIQSLLQIKAAAARANAH
LGVMAPDCAHAIAEAALSLTRNDRLMQHFPVDVFQTGSGTSSNMNANEVLASLAAIGLGR
PVSANDEVNQSQSSNDVIPSCIHVSAAKALAIELLPALGQLKSSIRTKAAGLSGSIKTGR
THLMDAMPVRLSQSLETWASQLDAQAMQLQSHLQAVQHLPQGGTAVGTGVNAPPGFSRTF
CDELNLITGLGFQPAANLFTYIASQDAAVALSGQLKSLAVTLMKIANDLRWMNSGPLSGL
GEIRLPALQPGSSIMPGKVNPVIPEAVAMVGAQVIGNDACITVAGQSGNFELNVMLPVIA
HNLLSSLQLLSKAMVTLADKAIAGFEVCDDRLARDLARNPILVTALNPVIGYAKSAEIAK
RAYAEGRPILEVAAEMTDMEKEELVRLLDPARLTGQE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccgaattgaacgcgacagcatgggtcaggtcgccgtgccgaaagaggcactt
tatggtgcccagacccagagggcggtggataactttcccatcagcggcacgcccatgcca
aaggcttttattcagtcgctgttgcagataaaggccgctgcggcgagggccaatgcccac
ctgggcgtaatggccccggattgcgcccatgccattgccgaagccgccctgtccctgacc
cgcaatgacaggctgatgcagcacttcccggtggacgtattccagacgggttcgggcacc
agcagtaatatgaacgccaacgaggtactggccagtttggcggccataggtctggggcgc
cccgtcagcgccaacgatgaggtcaaccaaagccagagcagcaatgatgtgatcccaagc
tgcattcatgtgtcagccgccaaggctttggcaatcgagctgttgccggcgctggggcag
cttaaatccagcattcggaccaaggccgccggtctgtccggttcaatcaaaaccggccgc
acccatttgatggatgccatgccggtgcgcctgagccagagcctggagacctgggccagt
cagttggatgcccaggcgatgcaactccaatcccatttgcaggcggtgcaacatttgccc
cagggtggcacggccgtgggtaccggggttaatgcgcccccaggcttttcccggaccttt
tgcgatgagctgaaccttatcacaggcctgggctttcaaccggccgccaatctgtttacc
tatatcgccagtcaggacgcggctgtggccttgtcgggtcagctcaagtccctggcggtg
accctgatgaaaattgccaatgacctgcgctggatgaactccggccccctgtccggtctt
ggggaaatacgcttgccggcgctgcaacccggctcttccatcatgccgggcaaggtgaat
cctgtgatccccgaggcggtggccatggtcggggcccaggtgataggcaatgatgcctgc
atcacggttgccggtcagtccggcaacttcgagctcaatgtaatgctgcccgttatagcc
cataacctgctgtccagtctgcaactcttgagcaaggccatggtgacgctggccgacaag
gccattgccggtttcgaggtctgtgatgacagattggcgcgggatctggcccgtaatccg
attttggtgacggcactcaatcccgtcatcggttacgccaagtcggcggagattgccaaa
cgggcctatgccgagggcagaccgatactggaagtggcagcggaaatgaccgacatggag
aaggaagagctggtgcgattgctggatcccgcccgcctcacgggacaggagtaa
DBGET
integrated database retrieval system