Shewanella sedimentimangrovi: JYB85_03920
Help
Entry
JYB85_03920 CDS
T07846
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB85_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssem03032
]
JYB85_03920
Enzymes [BR:
ssem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
JYB85_03920
DNA replication proteins [BR:
ssem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB85_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
DnaB_bind
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QSX37996
UniProt:
A0ABX7R2E2
LinkDB
All DBs
Position
complement(944492..946219)
Genome browser
AA seq
575 aa
AA seq
DB search
MAIPRDFINDLIARTDIVELIDRKVPLKKAGKNYSACCPFHSEKSPSFTVSRDKQFYHCF
GCGAHGNAIDFVMEYERLEFVDAIEELAGQLGLDVPREQGKGPRRDEGLSRDLYQLMEEA
ARHYQTQLRQHADRQKVEDYLAFRGLSKEVIDNFGIGFAPEGWDGLLGRYRQNQDALDKL
LTAGMLIENDGGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKG
NELYGLYELKQKHRDPQRVLIVEGYMDVVALAQFGLDYAVASLGTSTTAEQFQLLLRSAK
EVVCCYDGDKAGFEAAWRALDTALPLLKPGDSVKFMFLDQGEDPDSLVRKIGKDAFEEQI
AQAQSLQDYLFATLTEKYGADKGNLAKQAMALIEKIKDTVLANLLLEDLAHKLGMNSSED
LKKKLGLQTKPASQALGQKGLKGRGTPLRLAIALLVQHPALGQGLPKQPALEHLKMAGIE
LLNLLLELTRPQAINSAQLLEQFRESEHWNPLKKLAQWEHQVADENLQQEFRKALIWLNN
QYIEQRYQELSMKPDLTREEKLQLQKLITVMKGLK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaataccccgtgatttcatcaatgatctgatagcccgcaccgacatagtcgagtta
atcgaccgcaaggtgcccttgaaaaaggcgggtaaaaattactcggcctgttgtcctttt
catagcgaaaaatcaccctcctttaccgtcagtcgcgacaagcagttctaccattgcttc
ggctgtggcgcccatggcaatgccatcgactttgtcatggaatacgaacggcttgaattt
gttgatgccatagaagaactggccggccagctgggcctggatgtgccccgcgagcagggt
aagggaccacgacgggacgaaggtttgagccgggatctctaccaattgatggaagaggcc
gccaggcattaccaaacacagcttcgtcaacacgccgacaggcaaaaagtggaagactat
ctggcgtttcgcggtctatccaaagaggtgatagacaacttcggtatcggctttgccccc
gaaggctgggacggtctgcttggtcgctatcgccagaaccaggacgccctggacaagttg
ctcactgccggcatgctgattgagaatgacggcggcaaacgctacgaccgcttccgcgat
cggctgatgtttcccatccgcgatcgccgcggtcgggtcataggttttggtggtcgggta
ttgggggatggcacacccaagtacctcaattcgccggaaaccccgattttccataagggc
aatgagctttacggcctttatgaattgaaacaaaaacaccgggaccctcagcgggttttg
atagtcgaaggttatatggacgtggtggctctggcccagttcggactcgactatgcggtg
gcgtcactgggcacctccaccacggcggagcagtttcagttgttactgcgcagcgccaag
gaagtggtttgttgctacgacggtgacaaggccggtttcgaggccgcctggcgggcattg
gataccgccctgccgctgctcaaacccggcgacagcgtcaagtttatgtttttggatcag
ggagaagatcccgattcactggtacgcaagataggaaaagacgcctttgaggaacagata
gcccaggcacaatcgctgcaggattatctgtttgccaccctcacggaaaaatacggcgcc
gacaagggtaacctggccaaacaggccatggccctgattgaaaagattaaagacacagtg
cttgccaatctgctgctggaagatctggcccacaaactgggcatgaacagcagtgaggat
ctgaagaaaaagcttggtttgcaaaccaagccggcttcgcaggcactgggtcaaaagggc
ctcaagggccgtggtacaccgcttaggttggccattgccctcttggtccagcatccggcg
ttgggacagggtttacccaagcaaccggcgttggagcaccttaagatggcaggtatagaa
ttacttaacctgctgttggaattgacccggccgcaagccattaacagcgcacagctgctt
gagcagttcagggagagcgaacactggaatcccctgaaaaaactggcccagtgggaacat
caggtagcagacgagaacttgcagcaggaattccgaaaagcgctgatttggttgaacaac
caatatatagaacagcgctaccaggagttgagcatgaaacccgacctgaccagggaagaa
aagctgcaactccaaaagcttatcactgtgatgaagggcttgaagtga
DBGET
integrated database retrieval system
