Shewanella sedimentimangrovi: JYB85_04595
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Entry
JYB85_04595 CDS
T07846
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssem03021
]
JYB85_04595 (nusA)
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_04595 (nusA)
Transcription machinery [BR:
ssem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JYB85_04595 (nusA)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA transcription factors
JYB85_04595 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF2187
KH_NusA_C
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
QSX38112
LinkDB
All DBs
Position
1083873..1085372
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AA seq
499 aa
AA seq
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MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYEGDIDVRVAIDRKTGEYETFR
RWLVVDDQGQALENPFREITLEAARYENPEIQVGDFIEDEIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFFDKEGELITGVVKKTTRDSVVVDLGNNADGVLFKEDLISRESFRPG
DRVRSLLYAVRPEARGAQLFLTRTKPEMLIELFRVEVPEIADEMIQVMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQFVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWVLNVMTVEDMNKKHQAESAKVV
SLFMGALDVDEEFAQVLADEGFTSLEEIAYVPVSELLSIDGFDEDIVEALRERAKAAIST
RALASEEALDGAEPSEELLALEGMERHLAFVLASKGVVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEDA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctggtcgctgaggcggtttcaaacgaaaaggccgttccgcgt
gaaaagatttttgaggcgctggaaatcgccttggccacagcaaccaagaaaaaatacgaa
ggtgatatcgacgttcgcgttgccattgaccgtaagaccggtgagtacgagaccttccgt
cgctggttggtggtagacgaccagggccaggcgctggaaaacccgttccgcgaaattacc
ctggaagccgcacgctacgaaaatcctgagatccaggtgggtgatttcatcgaagatgaa
attgaatcggtcgtattcgaccgcatcaccactcaaacagccaagcaagtgatagtgcaa
aaggtacgtgaagccgagcgcgctcaggttgttgaacagttcttcgataaagaaggcgag
ctgattaccggtgtggtgaaaaagactacccgtgacagcgtcgtggttgaccttggcaac
aacgccgatggcgtgctgttcaaggaagatctgatcagccgtgaatctttccgtccaggg
gatcgcgtgcgttcactgctgtatgccgtgcgtcccgaggcccgcggtgcccagctgttc
ctgacccgcaccaagcctgagatgctgatcgaactgttccgcgttgaagtacctgagatt
gctgacgaaatgatccaggtaatgggtgctgcccgcgatcctggcagccgtgccaagatt
gccgtgaagtccaatgaccgtcgcatcgatcctatcggcgcctgtgttggtatgcgtggt
gcacgcgttcaggccgtgtccaacgaactcggtggcgagcgtgttgacatagtactgtgg
gacgacaatccggcccagttcgtgattaacgccatggcgccagccgatgtggcgtccatt
atcgtggacgaagacaaccactccatggatatcgccgttgaggccgactccttggcccag
gccattggccgtaacggtcaaaacgtgcgtctggccacccagttgaccggttgggtgctg
aacgtgatgacagtggaagacatgaacaagaagcaccaggccgagagcgccaaggtggtc
agtctgttcatgggtgccctggatgtggatgaagaatttgcccaggtgctggcggatgaa
ggctttacctcgcttgaggaaattgcctatgtgcctgtatctgagctgttgtccatcgat
ggcttcgatgaagacatagtagaagcactgcgtgagcgcgccaaagccgccatttctacc
cgtgccctggcatcggaagaagcgctcgacggtgcagagcccagtgaagaattgctggcc
ctggaaggtatggagcgccatctggcattcgtacttgccagcaagggcgtggtaacactg
gaagatttggccgaacaaggcattgatgatttgatcgaaatagaagaattgacagaagag
aaagctggtgcgctgatcatggctgcccgcaacatctgttggtttggcgaagatgcataa
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