Shewanella sedimentimangrovi: JYB85_04665
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Entry
JYB85_04665 CDS
T07846
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00240
Pyrimidine metabolism
ssem01100
Metabolic pathways
ssem01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JYB85_04665 (deoA)
Enzymes [BR:
ssem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
JYB85_04665 (deoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
DUF7204
Motif
Other DBs
NCBI-ProteinID:
QSX38124
UniProt:
A0ABX7R321
LinkDB
All DBs
Position
1102376..1103707
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AA seq
443 aa
AA seq
DB search
MFLAQEIIRKKRNGEALSKEEIQFFVKGITDNSVSEGQIAALGMAVYFNDMTMDERIALT
TAMRDSGTVLNWDSLQLDGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAIPGYQTEPSSELFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALAMDVKVGSGAFMPTYEASLELARSITAVANGAGTKTTALLT
DMNQVLASCAGNALEVKEAVDFLTGKYRNPRLYEVTMGLCAEMLQLGGLAATESEARAKL
NGVLDNGRAAEIFGKMVAGLGGPVDFVEAYDKYLPKAQIIRPVYADREGYAYSMVTRELG
LAVVTLGGGRRKPGDALDYSVGLSNVCALGQTINKDTPLAMIHAQSEAAFEEAAKAVRGA
IKVADSQPEKTPEIYQYVRAADL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttggcacaagagattatccgcaaaaaacgcaacggtgaggccctgagcaaggaa
gaaatccaattcttcgtcaaagggatcacagataacagcgtctcagaagggcagattgcg
gccctgggtatggcggtgtacttcaatgacatgaccatggatgagcgtatcgccctgacc
acggccatgcgcgattcaggcactgtccttaactgggacagtttgcaacttgatggccca
gttatcgacaagcacagtaccggcggagtcggtgatgtgatttccctgatgctcggcccc
atggcggccgcctgtggcggttatgttcccatgatttccggccgcggcttgggccacacc
ggtggcaccctggacaagtttgatgccattcccggctatcagaccgagccctcaagcgaa
ctgttccgcaaggtagtcaaggaagcgggcgtggccattatcggtcagaccggcgatctg
gtgcccgccgacaagcgcttctattccatccgcgacaacaccgcgaccgtggaatccata
tcccttatcaccgcatccattctgtcgaagaagctggccgcgggcctcgatgccctggcc
atggatgtaaaagtgggcagcggcgcctttatgcccacctacgaggcctcgctggaactg
gcccgctccattaccgcggtagccaatggtgccggcaccaagaccacggcactgctcacc
gacatgaaccaagtgctggcatcctgcgccggtaatgccctggaggtgaaagaagcggtg
gatttcctgaccggtaaataccgcaatccccgcctctacgaagtgaccatgggcctgtgt
gccgaaatgctgcaactgggtggcctggcggcaactgaatccgaagccagagccaagctc
aatggggtgcttgataatggtcgtgcggccgagatcttcggcaagatggtggccggtctt
ggcggtccggtggactttgttgaggcctacgataagtacctgccgaaggcgcagattatc
cgcccggtttatgcagaccgcgagggttatgcctatagtatggtgacccgtgaactgggg
ctggccgtggtcacactcggtggcggtcgccgtaaacccggtgatgccctggattacagt
gtcggtctgtccaatgtctgtgccctgggacagacaatcaacaaggacactccgctggcc
atgattcatgcccagtccgaggctgcattcgaagaagcggccaaggccgtcaggggcgcc
atcaaggtcgccgacagccaacccgagaaaacacctgagatctaccagtacgtacgtgcg
gcggatctgtga
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