Shewanella sedimentimangrovi: JYB85_04700
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Entry
JYB85_04700 CDS
T07846
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_04700 (radA)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JYB85_04700 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
SLFN-g3_helicase
GvpD_P-loop
ABC_tran
AAA_16
KdpD
Viral_helicase1
AAA_14
zf-LYAR
AAA_33
NTPase_1
cobW
AAA_29
nSTAND3
Zeta_toxin
AAA
AAA_24
DZR
Motif
Other DBs
NCBI-ProteinID:
QSX38131
LinkDB
All DBs
Position
1111211..1112575
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACHEWNSITEVRLGAATTGRSDRFSGYAGAAASEI
KTLDQIDLNELPRIGSSFTEFDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQLAETM
PALYVTGEESLQQVAMRAHRLGLPTAKLKMLSETSVETICEIALREQPKLVVVDSIQVMH
ISDVQSSPGSVAQVRESASFLTRFAKQHGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGDEASSGSLVMVV
WEGTRPLLVELQVLVDNSALSNPRRVAVGMDANRLAMLLAVMHRHGGLQMADQDVFVNVV
GGVKVSETSADLTLLLAMVSSFRGDILARDLVAFGEVGLSGEIRPVPNGQERLVEAAKHG
FRRAIVPRANVPKRPPEGMEIIGVSKLSEALAAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaaccgcttacgtctgcaatgagtgtggccaggactttccccgctgg
cagggccaatgcagcgcctgtcatgaatggaacagtatcacagaggtgcgcctgggggcg
gccacgacgggccgcagcgacaggttcagtggctatgctggtgctgcagccagtgaaatc
aagacgttggatcaaatcgatctcaatgagttgccccgtatcggcagcagtttcaccgag
ttcgaccgggtgctcggcggcggcatagtgcccggcagcgccatcctcatcggcggtcat
cccggcgccggcaagagtaccctgttgctgcaaaccctgtgtcagttggccgaaaccatg
ccggcactttatgtcacaggtgaagagtcgctgcagcaggtggccatgcgggcccatcgc
ctgggcttgccgaccgctaaactcaagatgctgtctgaaaccagcgttgaaaccatttgc
gaaattgccctcagggaacagcccaagcttgtggtggtggactccattcaggtgatgcat
atcagcgatgtgcagtcctcccccggcagcgtcgctcaggtgcgcgagtccgcctccttc
ctgacccgctttgccaagcagcacggtatagccgtcatcatggtgggccatgtgaccaag
gatggcagcctggccggtcccaaggtgctggaacactgtatcgattgctctgtgatgttc
gaaggcgacagcgacagccgctaccgcaccctgagatcccacaagaaccgattcggcgcc
atcaacgagctgggggtgttcgccatgaccgagcggggcctcaaggaagtggccaatccc
tcggccatcttcctctctcggggcgatgaagcgtcctccggctccctggtaatggtcgta
tgggaaggtacaaggccgctgctggtggagctgcaagtgctggtggacaactcggccctg
tcaaacccaagaagggtggccgtgggtatggacgccaaccgtctggccatgttgctggcg
gtgatgcatcgccatggcggtctgcaaatggcggatcaggacgtgtttgtcaacgtggtc
ggtggggtcaaggtcagcgaaaccagtgccgatttgaccctgctgctggccatggtatcg
agtttccgcggtgatattctggcgcgggatctggtggcttttggtgaggtgggcttgtcc
ggtgaaatccgccccgtgcccaatggtcaggagcggctggtggaagcggccaaacacggt
tttcgccgcgccatagtgccgagggccaatgtgcccaagcggccgcccgagggtatggaa
attataggtgtcagcaagctgtcggaggcactggcggcgctgtga
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