KEGG   Shewanella sedimentimangrovi: JYB85_04835
Entry
JYB85_04835       CDS       T07846                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ssem  Shewanella sedimentimangrovi
Pathway
ssem00260  Glycine, serine and threonine metabolism
ssem00460  Cyanoamino acid metabolism
ssem00630  Glyoxylate and dicarboxylate metabolism
ssem00670  One carbon pool by folate
ssem00680  Methane metabolism
ssem01100  Metabolic pathways
ssem01110  Biosynthesis of secondary metabolites
ssem01120  Microbial metabolism in diverse environments
ssem01200  Carbon metabolism
ssem01230  Biosynthesis of amino acids
ssem01240  Biosynthesis of cofactors
ssem04981  Folate transport and metabolism
Module
ssem_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:ssem00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    JYB85_04835
  09102 Energy metabolism
   00680 Methane metabolism
    JYB85_04835
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JYB85_04835
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    JYB85_04835
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    JYB85_04835
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    JYB85_04835
Enzymes [BR:ssem01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     JYB85_04835
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: QSX38154
LinkDB
Position
1143315..1144568
AA seq 417 aa
MLNKTMNIADYDPELFQAIQDETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKELFGATFANVQPHSGSQANMAVYMTLLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGKIDYVELERLALEHKPKMIIGGFSAYSGI
VDWAKLREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGLII
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVANAKAMVE
VFKSRGYKIVSGGTDNHLMLLDLIGRDLTGKEADAALGRANITVNKNSVPNDPRSPFVTS
GIRIGTPAITRRGFKEAEARELTGWICDVLDNAKDDAVIERVKGQVLELCARFPVYG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctgaacaaaaccatgaatattgccgactatgatcccgagctgttccaggcgatccag
gatgaaaccctgcgtcaggaagagcacattgaactcatcgcctccgagaactacacctct
ccccgcgtgatgcaggctcagggttcacagctgaccaacaagtacgccgaaggttatccc
ggcaagcgttactacggtggatgtgagtatgtcgacgtagtggaaaccctggccattgag
cgtgccaaggaactgttcggtgccactttcgccaacgtgcagcctcactccggctcccag
gccaacatggccgtgtacatgactctgctgcaacccggtgacactgtactgggtatgaac
ctggcccacggtggccacctgacccacggttcaccggtgaacttctccggcaagctgtac
aacatcattccttacggtatcgatgaagccggcaagattgactacgttgagctggagcgc
ctggcgctggagcacaagcccaagatgatcatcggtggcttctccgcttactcgggcata
gttgactgggccaagctgcgtgaaatcgccgacaagattggcgcctacctgtttgttgac
atggcccacgtggccggtctgattgccgccggtgtgtaccccaaccccgtgccacacgcc
cacgtggtgacttctactacccacaagaccctggccggtccccgtggtggtttgatcatc
tctgccgcggacgatgaagagctgtacaagaagctgaactctgcggtattccctggtggt
cagggtggtcctctgatgcacgtgatcgccggtaaagccgtggccttcaaggaagccctg
gagccagaattcaaggtataccaacagcaggttgtggccaacgccaaggccatggtggaa
gtgttcaaatcccgcggctacaagatagtgtccggcggtaccgacaaccacctgatgctg
ctggacctcatcggtcgcgatctgaccggtaaagaagccgacgcagccctgggccgcgcc
aacatcacagttaacaagaactcagtgccaaacgacccacgttcacctttcgtgacctcg
ggtatccgtatcggtactccggccatcacccgccgtggtttcaaggaagccgaagcccgt
gaactgaccggctggatctgtgacgtgctggacaatgccaaagacgacgcagttatcgag
cgcgtgaaaggccaggtgctggaactgtgcgcccgtttccctgtttacggttaa

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