Shewanella sedimentimangrovi: JYB85_04855
Help
Entry
JYB85_04855 CDS
T07846
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00740
Riboflavin metabolism
ssem00790
Folate biosynthesis
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01240
Biosynthesis of cofactors
Module
ssem_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
JYB85_04855 (ribB)
00790 Folate biosynthesis
JYB85_04855 (ribB)
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
JYB85_04855 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
JYB85_04855 (ribB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
QSX38158
UniProt:
A0ABX7R4X4
LinkDB
All DBs
Position
1147097..1148200
Genome browser
AA seq
367 aa
AA seq
DB search
MALHSIEEIIEDIRQGKMVILMDDEDRENEGDLIMAAELVTPEAINFMATYGRGLICQTM
TKARCQQLNLPLMVSNNNAQFSTNFTVSIEAAEGVTTGISAHDRAVTVKAAVAKDAKAAD
LVQPGHIFPLMAQDGGVLTRAGHTEAGCDLARLAGLEPSGVIVEILNEDGTMARRPDLEI
FSEKHGIKIGTIADLIEYRNNTETTVVREAQCRLPTRFGEFEMHTFRDTIDNQLHFALVK
GEVKEDILVRVHLTNTFNDLLHSERDQQRSWPLEVAMERIAKEGGVLVLLGNREHSSDIL
AKVKAFEAEDKGQAPASAKWAGTSRRVGVGSQILANLGVSKMRLLSSPKKYHSLSGFGLE
VTEYVAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacacagtatcgaagagatcatcgaggacatacgtcagggcaaaatggttatc
ctgatggacgatgaggacagggaaaacgagggcgacctgattatggcggctgagctggtg
acccccgaggccatcaacttcatggccacctatggccgtggcctcatctgtcagaccatg
accaaggcccgttgccagcagctgaacctgccgctgatggtaagcaacaacaatgcccag
ttctccaccaactttacagtgtccatcgaggccgccgaaggtgtgaccacggggatcagc
gcccatgaccgcgccgtcacagtcaaagccgccgtggccaaggatgccaaggccgccgat
ctggtgcagcccggtcatatcttcccgctgatggcccaggacggaggcgtgctgacccgc
gccggtcacaccgaagccggttgcgatctggcccgcctggcaggccttgagccttccggg
gtgatagtggaaatcctcaacgaagacggcaccatggcccgtcgtccggatctggaaatc
ttctccgaaaagcacggcatcaagataggcaccattgccgatctgattgaataccgcaac
aacacagaaaccacagtggtgcgcgaggcccagtgccgcctgccgacccgtttcggtgag
tttgaaatgcacaccttccgcgacaccatagacaaccagctgcactttgccctggttaaa
ggcgaggtcaaggaagatatactggtgcgggtgcacctgaccaataccttcaacgacctg
ctgcactccgagcgtgatcagcagcgcagctggccgctggaagtggccatggagcgcatc
gccaaagagggtggggtgctggtgctgctgggtaaccgtgaacacagcagcgatatcctg
gccaaggtcaaggccttcgaggccgaggacaagggccaggcgcctgcgtccgccaagtgg
gcaggtacctcgcgccgtgtgggtgtcggctcacaaattctggcgaacctgggtgtcagt
aagatgcgcctgctgagctcaccgaagaagtatcattcgctgtcgggcttcggtctggaa
gtgacagagtacgtggccgagtaa
DBGET
integrated database retrieval system
