Shewanella sedimentimangrovi: JYB85_05120
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Entry
JYB85_05120 CDS
T07846
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00500
Starch and sucrose metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JYB85_05120 (glgX)
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JYB85_05120 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
QSX38210
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All DBs
Position
1196518..1198605
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AA seq
695 aa
AA seq
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MTGRCRVGKVYPPGASLGEGGVNFSVFSRHAAALELCLFDGEGLETARLPMVQQGFWWCL
WVDGLGAGQAYGFRAHGPWEPTLGHRFNRHKLLLDPYARALTGVPRISGASYAHVPGQAL
EDALLDETDNAGLMPKCLVLDVGALPPFEHAKPGHAMAASVLYELHLKGFSMGFPGIEES
KRGTFAALAEPAVLAYFQSLRISAIELLPVQAFFSEPFLLDKGLVNYWGYNSIGFMAPHS
PYGDIAQFRAMVDALHGIGVEVILDVVYNHSAEGNRLGPIYSFRGLDNACYYRLSGGDGR
FYINDSGCGNTLDLCQPQVLTLVMDSLRYWVEVGGVDGFRFDLAACLGRESYGFDPGAGF
FDALAQDPVLRQVKLIAEPWDVGPGGYQLGHFPVSFSEWNDRYRDTLRRLWRGDPGMLPE
FARRFHGSSDLFEHTGRGPAASINFICSHDGFTLRDLLSFTRRHNEANGEDNRDGHNENF
SSNHGLEGGGGAGLEALRQRKARSLLACLLLSQGVPMLLAGDELWHSQRGNNNAYCQDNA
IGWIDWQGADPAMQRFTADLIAIRRRFGFLCRERYIHCDNPAAPAALAWFSQHGEPMSRS
QWSDAHCTCLSLLLSCREAPYSDALLVMLNTGSEPLRFLAPAVPIEGEFHCLLSSADSDL
VGTRLAPGGDIWVPAMGVLLFHGTLPALIHIASDC
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacaggccgctgccgcgtcggcaaggtctatcccccgggcgccagcctgggggagggc
ggtgtcaatttctccgtattcagccgccacgccgcggcgctggagctatgcctgttcgac
ggcgaaggattggaaaccgctcgcctgcccatggtgcagcagggcttttggtggtgcctg
tgggtcgatggccttggcgccggtcaggcctacggttttcgggcccatggcccctgggaa
ccgaccctgggccacaggtttaaccgccacaagctgctgctggacccctatgccagggcg
ctgaccggtgtgccgcggatttccggggccagctacgcccatgtgccgggccaggccctg
gaagacgcgctgctggatgagacagacaacgccgggctgatgcccaagtgtctggtgctg
gacgtaggcgccttgccaccatttgagcatgccaaacccggccatgccatggcggcaagt
gtgctgtacgagctgcacctcaagggcttttccatgggctttcccggcatagaagagtcc
aagcggggcacctttgccgccctcgccgaacctgctgtgctggcctatttccaaagtctt
aggatcagcgccatcgaactattacctgtgcaggcctttttcagcgagccctttttgctc
gacaagggcctggtcaattactggggctacaacagcattggctttatggcgccccacagc
ccctacggcgatatagcccagttccgcgccatggtggatgcgctccacggcattggcgtc
gaagtgatcctggacgtggtctacaaccacagcgccgagggtaaccgtttggggccgatt
tacagcttccgcggcctcgacaacgcctgttactaccgcctcagcggtggcgatggccgt
ttctatatcaacgacagcggctgcggcaatacccttgacctgtgccagccccaggtgctg
accctggtgatggactcgctgcgctactgggtcgaggtcggcggcgtcgacggcttccgc
ttcgatctcgccgcttgtctcgggcgcgagtcctatggcttcgatccgggcgccggcttc
ttcgatgccctggcccaggatcccgtgctgcgacaggtgaagctgattgccgagccttgg
gacgtgggcccgggcggctaccagctgggacactttcctgtgtctttctccgagtggaat
gacaggtaccgggataccctgaggcgcctgtggcgcggcgatcccggcatgctgcctgag
tttgcccgccgcttccatggctccagcgatctgttcgaacacacgggccgggggcccgcc
gccagcatcaacttcatctgcagccacgacggtttcaccctgagggatctgctcagtttc
acccgccgccacaacgaggccaacggtgaggacaaccgcgacggccacaatgaaaacttc
agcagcaaccatggtctcgaaggcgggggcggtgccggcctggaggcgctgcgccaacgc
aaggcccgcagcctgctggcctgcctgttgttgtcccagggggtgcccatgttgctggcg
ggcgacgagctgtggcacagccagcgcggcaacaacaatgcctattgccaggacaatgcc
atcggctggattgactggcagggggccgatcccgccatgcagcgctttaccgcggatctt
atcgccatccgccgccgcttcggctttttgtgccgcgagcgttatatccactgcgataac
ccggcggcgccggcggccctggcctggttcagtcaacatggcgagcccatgagccgcagc
cagtggagcgatgcccactgcacctgcctgagcctgctgttgtcctgccgcgaagccccc
tatagcgatgccctgctggtgatgctcaataccggcagcgagccgctgcgcttcctggct
cccgccgtgcccatagagggtgaattccactgcctgctgtcgagcgccgacagcgatctg
gtgggcacccgcttggccccggggggggacatctgggttccggccatgggggtgctgttg
ttccacggcactctgcctgcccttattcatattgcaagcgattgttaa
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