Shewanella sedimentimangrovi: JYB85_05140
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Entry
JYB85_05140 CDS
T07846
Name
(GenBank) EAL domain-containing protein
Organism
ssem
Shewanella sedimentimangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS_9
PAS
PAS_4
PAS_8
PAS_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
QSX38213
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Position
1204448..1207486
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AA seq
1012 aa
AA seq
DB search
MEQGIFFPLIQNAALLLALVFVYDAIPRRHKRKYFLLWRIGIGVIVGAIGMTIMSTPWVF
APGIIFDTRSVLLAVSGLFFGGLPTMVAVIMTAAYRYAIGGPAMWIGIAVIISSGAVGAL
WRLRRKSMLASMGWGELYGIGFLVHLIMLSWMLILPWDTAWRVLSQITLPVLTIYPLATM
MVGRLLSRRIEIERDDKMRLQDDFLFRSQFDAGNIGIAIGTVDKCWIKVNSRLCQMFKYS
EKELLRLGWDQLSHPDDLYTDTQQFERLLLGDIDQYELKKRFFAKDGTLVYTLMSVSCKR
SNGRVQLVIAGFLDITEQTLAEQSVSASREQLQLVLDSGELGFWDWDIPRDEVIRNERCA
QMLGVSHNELMDNHRIWINAIHPDDRVEMLRAMELHLQGRTANFSMDYRLKTADGTERWI
RDRGRVVARDEQGKPLRVCGIHVDISQSRKQQESLELAASVYNSSSEAMSVLDAKGHIIT
INAAFSRITGYNESEVQGQHVSLFYCDTNGENFYREMNQQLREKGHWQGEMWQKRKNGDE
YLIWLTVNTIYDRQHRPHRRVALFSDITEMKQQEQLIWQQANYDPLTGLPNRRMLLDYLG
REIVACERRKRHFALLFLDLDFFKEINDTLGHDMGDQLLVECSRRLQLCVRDSDVVARLG
GDEFTVILRDIAEQSGVERVAEQILKALAEPYQLGEHTSYISASIGITLYPEDADSREAL
LKHADQAMYAAKAQGRNRFNFFTPSMQEYAHFRMHLIQDLRLAVERQEFSLFFQPIVELK
SGDIHKAEVLLRWQHETRGYVSPADFIPVAEETGLILEIGAWVLEQAARQSKEWQQKHER
IVQLSINKSPIQFRDEGEYFSRWMSLLKELQLGPGGICVEITEGLLLDAATGVSDKLLAY
RDAGIQVALDDFGTGYSSLAYLKKFDIDYLKIDQSFIRNLVDDSSDHSLCEAIIVMAHKL
GMKVIAEGVESEDQRELLRTMGCDYAQGYLFSRPMSAAEFEQEFLLDDKANA
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggcatcttttttccgttgatccagaacgcggccctgctgctggcgttggtg
ttcgtctatgacgccattccccgccgtcacaaacgcaagtacttcctgctctggcgcatt
ggcataggggttatcgtcggcgccatcggcatgacaatcatgtcgacaccctgggttttt
gcccccggcatcatcttcgatacccgctcggtgctcttggccgtctccggactgtttttc
ggtggcctgcccaccatggttgccgtgatcatgacggctgcctatcgctacgccatcggt
ggccctgccatgtggataggcattgcggtcatcatctccagtggcgccgtaggggccctg
tggcggctgcgccgtaaatccatgctggcatccatgggctggggcgagctctatggcata
ggtttcctggtacacctgattatgctgtcctggatgttgattttgccctgggacacggcc
tggagagtgctgtcgcagatcaccctgccggtgctgaccatatacccgctggcaaccatg
atggtgggacgcttgctgtcgcggcgcatagagatagagcgggacgacaagatgcgcctg
caggatgacttcctgttccgctcccagttcgatgccggcaacataggcatagccataggc
acggtcgacaagtgctggatcaaggtcaactcccgcctgtgtcagatgttcaaatacagc
gaaaaggagctgttgcgcctgggctgggatcagctgtcacacccggacgatctctatacc
gacacccagcagttcgaacgcctgctgctgggggatattgaccaatacgagctcaagaaa
cgcttttttgccaaagacggcaccctggtctacaccctgatgagcgtttcctgcaaacgc
agtaatgggcgggtgcagctggtgatcgccggttttctggatatcactgagcagaccctg
gcggagcagtcggtcagcgccagtcgcgagcagctgcagctggtactcgacagcggcgag
ctggggttttgggactgggatatccccagggatgaagttattcgcaacgagcgctgcgcc
cagatgttgggggtgagccacaatgagttgatggacaatcacaggatctggatcaacgcc
atccatcccgacgacagggtggaaatgctaagggccatggagctgcatctgcagggccgt
accgccaacttcagtatggactaccggttgaaaaccgccgatggcaccgagcgctggatc
cgcgaccggggtcgggtggtggccagggatgagcagggcaaaccactgcgggtctgcggc
atccatgtggacatcagccagagccgcaaacaacaggaatccctggagctggcggcctct
gtttacaacagttccagcgaggccatgagtgtgctcgacgccaagggccatattatcacc
atcaatgccgccttttcccgcattactggctacaacgaaagcgaggtccaggggcaacat
gtgtccctgttctactgcgataccaacggcgaaaatttctatcgcgagatgaaccaacag
ctgcgtgaaaagggccactggcagggagaaatgtggcaaaagcgcaaaaacggcgacgag
tatctgatctggctgacagtcaataccatctatgatcgccagcacaggccacaccggcgg
gtggcgctgttctcggatatcactgaaatgaagcagcaggagcagctgatctggcagcag
gccaactacgatccgctgacgggcttgccgaaccggcgcatgttgctcgattatctgggg
cgggaaatcgttgcctgcgaacggcgcaaacgtcactttgcccttttgttccttgatttg
gatttcttcaaagaaatcaatgacacccttggccatgacatgggtgatcagctgctggtt
gagtgcagtcgccgcctgcaactgtgcgtgcgcgattcggacgtggtggcgcgactgggg
ggcgatgagtttaccgtgatcctgcgggacatagcagagcaatccggggtcgagcgggtg
gctgagcagatcctcaaggccctggccgaaccctaccaactgggggagcacaccagttac
atcagcgccagtatcggcattaccctgtatccggaagatgccgacagccgcgaggcgctg
ctgaaacacgccgaccaggccatgtatgccgccaaggcccagggccgcaaccgcttcaac
ttcttcaccccctcaatgcaggaatatgcccacttccgcatgcaccttattcaggacctg
cgtttggctgtggagcggcaggagttcagcctgtttttccagccgatagtggagctgaaa
agcggcgacattcacaaggccgaggtgctgctgcgctggcagcatgagacccgcggctat
gtctcgccggcggactttattcccgtggccgaggagacaggccttattctggagataggt
gcctgggtgctggaacaggcggcaagacagagtaaggaatggcaacaaaaacatgaacgt
atagtgcagctcagtatcaacaagtcaccaatccagttccgtgatgagggggaatatttc
agccgctggatgtcactgcttaaggagctgcaattggggcccggcggcatatgtgttgag
atcaccgagggtctgctgctcgacgccgccaccggggtatcggataagctgctggcttac
cgcgatgccggcattcaggtggccctggatgactttggcaccggctattcctctttggcc
tacctgaaaaagttcgatatagattatttgaaaatcgatcagtcctttatccgcaatctg
gtggatgattccagcgatcattccctgtgcgaggccattatcgtcatggcccataaactc
gggatgaaggtgatagccgaaggggtcgagagcgaggaccagcgtgaactgctgcgcacc
atgggctgcgactatgcccagggctacctgttctcccgtcccatgagcgccgccgagttc
gagcaagagttcctgctggatgacaaggccaatgcctga
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