Shewanella sedimentimangrovi: JYB85_05170
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Entry
JYB85_05170 CDS
T07846
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00730
Thiamine metabolism
ssem00900
Terpenoid backbone biosynthesis
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB85_05170 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JYB85_05170 (dxs)
Enzymes [BR:
ssem01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
JYB85_05170 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
Transketolase_N
E1_dh
Thi4
Motif
Other DBs
NCBI-ProteinID:
QSX38219
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Position
complement(1213236..1215101)
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AA seq
621 aa
AA seq
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MSLDISQFPVLAKANTPEELRQLPQSQLPQLANELRQFLLKSVGMSSGHFASGLGTVELT
VALHYVYNTPFDRLIWDVGHQAYPHKILTGRRERMHTIRQKNGLHPFPWREESEYDTFSV
GHSGTSVSAALAMAVAADKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHKDMLVVLND
NEMSISENVGALNNHLAQLMSGRLYTTIRESGKKVLKGMPVIKEMARRTEEHLKGMVVPG
TLFEELGFNYIGPIDGHDVDAMVETLRNMRGLKGPQILHIMTKKGRGYEPAEKDPIGWHA
VPKFDPSQFRKPATKPGLPTFSQVFGKWLCDMAEKDSKLLGITPAMREGSGMVEFSQRFP
EQYFDAAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPLLFAVDR
GGIVGADGPTHQGAFDLSFLRCVPNMLIMAPSDENECRQMLYTGYCHNEGPSAVRYPRGS
ATGAEQVEQMTALPIGKGLVKRHGKAIAVLNFGTTLAAALTAAEALDATVADMRFVKPLD
EALVLELAANHEVLVTVEENAIMGGAGSGVLELLAKHRICKPVLQIGLPDEFIKHGSPEE
ILAELGLDAAGIERQIRAYID
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggacatttcccaatttccggtactggccaaggccaacaccccagaagaactc
aggcaattgcctcagtcacagctgccgcaactggccaatgaattacgccagttcctgctt
aaatccgttggcatgtccagtggccacttcgcctcgggcctgggtacggtcgagctgacc
gtggccctgcattatgtgtacaacacccccttcgaccgcctgatctgggacgtgggccac
caggcctatccccataagatcctcaccggtcgccgcgagcggatgcacaccatcagacaa
aagaatggcctgcaccccttcccctggcgggaagagagtgaatacgacaccttcagcgtc
ggtcactcgggcacttcggtctcggccgcgctcgccatggcggtcgccgccgacaaggaa
caggcggggcgcaaagtggtggccgtcataggtgacggcgccatgacaggtggcatggtg
ttcgaggccatgaaccatgccggcgatctgcacaaagacatgctggtggtgctgaacgac
aacgaaatgtccatttcggaaaacgtcggcgccctcaacaaccatctggcccaactgatg
tccggccgcctgtacaccaccatccgtgaaagcggcaaaaaggtgcttaagggcatgccg
gtgatcaaggaaatggccagacgcaccgaagaacacctcaagggcatggtcgtccccggc
accctgttcgaggagctgggcttcaactacataggccccatcgacggtcacgatgtggat
gccatggtcgagaccctgcgcaatatgcgcggcctcaagggcccgcaaatcctgcacatc
atgaccaagaagggccgcggctacgagccggcggagaaagatcccattggctggcacgca
gtgcccaagttcgaccccagccagttccgcaaaccggccaccaagccgggactgcccacc
ttcagtcaggtctttggcaaatggctgtgcgacatggccgaaaaagacagcaagctgctc
ggtatcaccccggccatgcgtgaaggttcgggcatggtggaattttcccagcgcttcccc
gagcagtatttcgatgccgccatcgccgaacagcatgccgtgaccctgggggccggtttt
gcctgcgaaggctataagcccgtggtcgccatctactccacctttttgcagcgcggttac
gatcagctgatccacgatgtggcgctgcaacgtctgccccttctgtttgccgtcgatcgc
ggcggcatagtgggtgccgatggtccgactcaccagggggcctttgatctcagcttcctg
cgctgtgtgcccaacatgttgatcatggctccaagcgatgaaaacgagtgccggcagatg
ctgtacacaggctattgccacaacgaagggccaagcgcggtgcgctatccccgaggcagt
gccacaggtgccgagcaggtggaacaaatgactgccctgcccataggcaaggggttggtg
aaacgccatggtaaggccatagccgtgctcaacttcggcaccacgttggccgcggcgctg
accgcggccgaggcactggatgccacagtggccgacatgcgtttcgttaagcctctggat
gaagccctggtgctggaactggctgccaaccatgaggtgctggtgactgtggaagagaac
gccatcatgggcggcgccggcagcggcgtgctggaactgttggccaaacaccgcatctgc
aagcctgtgctgcaaatcggcctgcccgatgaattcatcaagcacggatcgccggaggaa
atcctcgccgagctgggcctcgatgccgccggtatcgagcgtcagatccgcgcctatatc
gactga
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