Shewanella sedimentimangrovi: JYB85_05280
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Entry
JYB85_05280 CDS
T07846
Name
(GenBank) isocitrate dehydrogenase
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00020
Citrate cycle (TCA cycle)
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
ssem01210
2-Oxocarboxylic acid metabolism
ssem01230
Biosynthesis of amino acids
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB85_05280
Enzymes [BR:
ssem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
JYB85_05280
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Motif
Pfam:
Iso_dh
DUF2934
Motif
Other DBs
NCBI-ProteinID:
QSX38239
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All DBs
Position
complement(1236582..1237589)
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AA seq
335 aa
AA seq
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MSKRTITVIPGDGIGPSIIDSALKILDKAGCDFEYEFADAGLTALEKHGELLPQRTLDLI
EKNRITLKGPLTTPVGEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYDNIDIITVREN
TEGMYSGYGQKVSEDGSTAEATSVITRQGAEQITTFAYELARKEGRKKVTIVHKANIMKS
TSGLFLKVAREVSQRYPDIITEEMIVDATCMKLVMNPENFDVMVTTNLFGDILSDLCAGL
VGGLGMAPGANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKAAAI
RNAVSAVIAEGDRTTRDLGGTHGTTDFTQAVLDRL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaacgattaccgtgatccctggcgatgggatcggtcccagcatcatagat
tctgccctcaagatcctcgacaaggcaggctgcgatttcgaatacgaatttgccgatgcg
ggcctgacggcactggaaaagcacggtgaactgctgccacagcgtactttggatcttatt
gaaaagaaccgtatcacacttaaaggacccctgaccacgccggtgggtgaaggttttacc
tccatcaacgtgacgctgcgcaagaagtttggcctctacgccaacgtgcgccctgtactg
tcttttaaaggcacccaggcaagatacgacaatatcgacatcatcacagtgcgtgagaac
actgagggcatgtactctggttacggccagaaggtgtccgaggatggcagcacagccgaa
gccaccagcgtcatcacccgtcagggcgccgagcagatcaccactttcgcctacgagctg
gcccgtaaagaaggccgcaagaaggtgaccatagtacacaaggccaacatcatgaaatcc
acttcaggcctgttcctgaaggtggcccgtgaagtgagccagcgttatcccgacatcatc
accgaagaaatgatcgtggatgccacctgtatgaagctggtgatgaatccggaaaacttc
gacgtgatggtcaccaccaacctgttcggtgacatactgtcggatctgtgtgccggtctg
gtgggtggtctgggtatggcacccggtgccaacatcggccgcgatgccgcaattttcgaa
gcggtacacggcagcgccccggacatcgccggtaaaaacctggccaaccccacctctgtg
atcctggcctccatccagatgctggaatacctgggcatggctgacaaggccgccgccatc
cgcaacgcggtttctgccgtaattgccgaaggtgaccgcaccacccgcgatctcggtggc
acccatggcaccaccgacttcacccaggcggtgctggacagactctga
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