Shewanella sedimentimangrovi: JYB85_05780
Help
Entry
JYB85_05780 CDS
T07846
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_05780
01504 Antimicrobial resistance genes [BR:
ssem01504
]
JYB85_05780
Transporters [BR:
ssem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB85_05780
Antimicrobial resistance genes [BR:
ssem01504
]
Gene variants
Tetracycline resistance genes
Transporters
JYB85_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Tad
Motif
Other DBs
NCBI-ProteinID:
QSX38334
LinkDB
All DBs
Position
1379588..1381153
Genome browser
AA seq
521 aa
AA seq
DB search
MTVMSYAESALSLLPPVVAIVLAILTRRVLVSLGLGIVAGILLLSDFSPLDACLLLGERV
VALVWSDGAPNSWNLYILGFLVLLGMITALISASGAARAFADWARVRIRTKRDAQLLTLF
LGCVVFIDDYFNSLVVGSIARPLTDRYYVSRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
LIGGILASHGISDTGHLAVFIQLIPMNFYAIFALALLLCVVLFGLDVGAMRRHEQDALRG
NLYDETKGVPPGSNVELPEEGSGKVAGLFVPIGVLVLATVSFMIGSGAMALADAGLPFSL
IGAFEKTDVGASLFFGALLGLSATLALVLWQGMAPRLVKHAAVQGARSMVPALYILLFAW
TIAGIIGELGTGKYMASLAGGNLPFALLPALMFVLAGLTAFATGTSWGTFGIMLPIAADM
AMGSHSAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVLTQLPYALIVAI
ISLVGYTVMGMIESVWAGFGAASLTFVVAVLWLKHKSGARD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaatgagttacgccgaatcggcgctgtctctgctgccacccgtggtggcaatt
gtgctggctattttgacccgcagggtgctggtgtcccttgggctgggcattgtggccggg
atcctgctgctgagcgacttttctccccttgatgcctgcctgctgctgggtgaacgggtt
gtcgccctggtgtggagcgatggtgcccccaacagctggaatttatacattctgggattt
ctggtgctgcttgggatgatcaccgcccttatcagcgccagtggcgcggcccgggccttt
gccgactgggccagggttcggatccgcactaaacgtgatgcccagttgctgaccctgttt
ctgggctgtgtggtctttatcgacgactatttcaacagcctggtggtgggctccatcgcc
cggcccctgaccgacaggtattatgtgtcccgggccaagctggcttatctgctggactcc
accgccgcgcccgtgtgtgtgatttcccctgtatccagttggggggcttatatcatcgcc
ctgataggtggcattctcgcgtcccatggcatcagcgacaccggccacctggcggtattt
atccaactgatcccgatgaacttctatgccatttttgccctggcattattgctgtgcgtg
gtgctgttcggtctggatgtgggggccatgcgccggcatgagcaagatgccctgcgcggc
aacctttatgatgaaaccaagggcgtgcctccgggcagcaatgtcgagttgcccgaagag
ggcagcggtaaggtcgccggcttgtttgtgcccataggtgtgctggtgctggcgacggtc
agctttatgatcggcagcggcgccatggcactggccgatgccggcctgcctttctcactg
attggtgcctttgagaaaacggatgtgggcgcatcgctgttttttggtgcgctgttggga
ctcagtgccaccctggcactggtgctgtggcagggcatggctcctcggttggtcaaacac
gccgcggtacaaggggcccgttccatggtcccggcgctgtatatcttgctgtttgcctgg
accatagcaggcatcataggagaacttggcacgggtaaatacatggccagtctggccggt
ggcaacctgccatttgccctgctgccggcgctgatgtttgtgctggcaggcctgacggcg
ttcgccaccggcaccagctggggcacctttggcatcatgttgcccatagccgccgatatg
gccatgggcagtcacagtgccatgatgctgcccatgctggcatctgtgctagccggcgcc
gtgtttggcgatcactgctcacctatttccgacaccacgattttgtcctccaccggcgcc
agctgccatcacatagaccatgtgctgacccagctgccatatgccctgattgtcgccatc
atcagcctggtgggttatacggtgatgggtatgatagagtccgtatgggccggtttcggt
gcggcctccctgaccttcgtggtggcggtgctgtggctgaaacacaagtccggcgcccgc
gactga
DBGET
integrated database retrieval system
